RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 FAM46CQ5VWP2 391 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 RETSATQ6NUM9 610 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 DPY19L3Q6ZPD9 716 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 PIP4P1Q86T03 277 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 PEBP4Q96S96 227 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDK7-212ENST00000515180 TM6SF2Q9BZW4 377 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 XPO4Q9C0E2 1151 aaKnown RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 KLC2Q9H0B6 622 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 PCSK1NQ9UHG2 260 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 FNDC3AQ9Y2H6 1198 aaKnown RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 DOCK9Q9BZ29 2069 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 CACNA1EQ15878 2313 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 A0A1W2PQJ5 194 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 C10orf142B7Z368 130 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 SH3BP5O60239 455 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 RAMP2O60895 175 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 TOP3BO95985 862 aaKnown RBP13.33□□□□□ -0.28
CDK7-212ENST00000515180 WNT1P04628 370 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 GYPCP04921 128 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 CEACAM1P13688 526 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 GKP32189 559 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 TAS2R38P59533 333 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 POLD3Q15054 466 aaPredicted RBP13.33□□□□□ -0.28
CDK7-212ENST00000515180 PIP5KL1Q5T9C9 394 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 ZNF354CQ86Y25 554 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 FAM131CQ96AQ9 280 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 ZDHHC5Q9C0B5 715 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 ISCUQ9H1K1 167 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 MAGEH1Q9H213 219 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 CAPN11Q9UMQ6 739 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
CDK7-212ENST00000515180 WASF2Q9Y6W5 498 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 NCOR2Q9Y618 2525 aa13.33□□□□□ -0.28
CDK7-212ENST00000515180 CHD5Q8TDI0 1954 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 LEFTY1O75610 366 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 SPINK2P20155 84 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 PMLP29590 882 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 CASP14P31944 242 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 RECQLP46063 649 aaPredicted RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 GRIA4P48058 902 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 CCR5P51681 352 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 CLCN6P51797 869 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 ZBED6P86452 979 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 SLC20A2Q08357 652 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 TEAD4Q15561 434 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 CARD16Q5EG05 197 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 ADAT2Q7Z6V5 191 aaKnown RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 RYBPQ8N488 228 aaPredicted RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 RTL3Q8N8U3 475 aaKnown RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 RNF214Q8ND24 703 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 TMIEQ8NEW7 156 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 OR6K2Q8NGY2 324 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 KLK6Q92876 244 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 HMCESQ96FZ2 354 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 EPAS1Q99814 870 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 HEPHQ9BQS7 1158 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 SNRNP25Q9BV90 132 aaKnown RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 SLC32A1Q9H598 525 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 DHX35Q9H5Z1 703 aaKnown RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 OSGEPQ9NPF4 335 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 AASDHPPTQ9NRN7 309 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 TM7SF3Q9NS93 570 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 IL36AQ9UHA7 158 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 AP4E1Q9UPM8 1137 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 CA5BQ9Y2D0 317 aa13.32□□□□□ -0.28
CDK7-212ENST00000515180 LUC7L2Q9Y383 392 aaKnown RBP13.32□□□□□ -0.28
CDK7-212ENST00000515180 DNAH14Q0VDD8 3507 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 A0A087X0T9 212 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 RASA4BC9J798 803 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 H0Y8X5 98 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 RASA4O43374 803 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 BUB1O43683 1085 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 KDELR3O43731 214 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 CER1O95813 267 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 PRNPP04156 253 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 SERPING1P05155 500 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 FAM228BP0C875 321 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 MIPP30301 263 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 ETFBP38117 255 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 CCNHP51946 323 aaPredicted RBP13.31□□□□□ -0.28
CDK7-212ENST00000515180 TPI1P60174 286 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 RACK1P63244 317 aaKnown RBP13.31□□□□□ -0.28
CDK7-212ENST00000515180 IL9RQ01113 521 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 FOXC1Q12948 553 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 ATXN7L2Q5T6C5 722 aaPredicted RBP13.31□□□□□ -0.28
CDK7-212ENST00000515180 IL27RAQ6UWB1 636 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 CYP4V2Q6ZWL3 525 aaPredicted RBP13.31□□□□□ -0.28
CDK7-212ENST00000515180 PCDH20Q8N6Y1 951 aaKnown RBP13.31□□□□□ -0.28
CDK7-212ENST00000515180 SYN2Q92777 582 aaPredicted RBP13.31□□□□□ -0.28
CDK7-212ENST00000515180 CELF6Q96J87 481 aaKnown RBP13.31□□□□□ -0.28
CDK7-212ENST00000515180 SERAC1Q96JX3 654 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 BTBD6Q96KE9 485 aa13.31□□□□□ -0.28
CDK7-212ENST00000515180 CNTNAP3BQ96NU0 1288 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms