RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 OR2T34Q8NGX1 318 aa16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 ISG20Q96AZ6 181 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 CEP44Q9C0F1 390 aa16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 KLC2Q9H0B6 622 aa16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 MIR1-1HGQ9H1L0 117 aa16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 CATSPERBQ9H7T0 1116 aa16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 EBF2Q9HAK2 575 aa16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
PDLIM5-216ENST00000511767 CABIN1Q9Y6J0 2220 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 CHD5Q8TDI0 1954 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 RASA4BC9J798 803 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 RASA4O43374 803 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 PRPSAP2O60256 369 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 FSBPO95073 299 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 CD27P26842 260 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 IL1R2P27930 398 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 BNC1Q01954 994 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 CNTN1Q12860 1018 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 PIGHQ14442 188 aaPredicted RBP16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 ARSIQ5FYB1 569 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 DAB2IPQ5VWQ8 1189 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 SARM1Q6SZW1 724 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 PCDH20Q8N6Y1 951 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 OR14C36Q8NHC7 312 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 VOPP1Q96AW1 172 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 KCTD15Q96SI1 283 aaPredicted RBP16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 SNRNP25Q9BV90 132 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 TNKS2Q9H2K2 1166 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 OSGEPQ9NPF4 335 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 AP4E1Q9UPM8 1137 aa16.46■□□□□ 0.23
PDLIM5-216ENST00000511767 SSU72P8A0A1W2PR75 194 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 FAM47DPA6NHR8 397 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 LRRC72A6NJI9 287 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 FGF10O15520 208 aaPredicted RBP16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 SYPP08247 313 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 TCF4P15884 667 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 CCR5P51681 352 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 SLC18A3Q16572 532 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 C22orf39Q6P5X5 142 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 ZCCHC9Q8N567 271 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 ARRDC3Q96B67 414 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 BTBD6Q96KE9 485 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 HEPHQ9BQS7 1158 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 NUP85Q9BW27 656 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 KDM4CQ9H3R0 1056 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 LRRC19Q9H756 370 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 DONSONQ9NYP3 566 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 CWC15Q9P013 229 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 IP6K2Q9UHH9 426 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 FCF1Q9Y324 198 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3DA0A087WVF3 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3IA0A087WXS9 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3EA0A087X179 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3KA0A087X1G2 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 A0A1W2PPC4 97 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3FA6NER0 549 aaPredicted RBP16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3LB9A6J9 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 C1QTNF3-AMACRE9PGA6 284 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 MYO1FO00160 1098 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 EEF2KO00418 725 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 SLC7A4O43246 635 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 PRNPP04156 253 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3HP0C7X1 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 RARAP10276 462 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 ERCC2P18074 760 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 MAPK8P45983 427 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 CSNK1EP49674 416 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 DNA2P51530 1060 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 NDST2P52849 883 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 ADPRHP54922 357 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TAS2R38P59533 333 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TPI1P60174 286 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 FOXK2Q01167 660 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 SERINC3Q13530 473 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TSR1Q2NL82 804 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 POM121L1PQ3SYA9 428 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 INO80DQ53TQ3 878 aaPredicted RBP16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 KCNT1Q5JUK3 1230 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 AGBL4Q5VU57 503 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 AFMIDQ63HM1 303 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3GQ6DHY5 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TXNRD3NBQ6F5E7 133 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3CQ6IPX1 549 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 LEKR1Q6ZMV7 388 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TBC1D3Q8IZP1 549 aaPredicted RBP16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 HMCESQ96FZ2 354 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 CCDC114Q96M63 670 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TRIM5Q9C035 493 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 SLC39A8Q9C0K1 460 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 TM9SF3Q9HD45 589 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 ABHD10Q9NUJ1 306 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 HECAQ9UBI9 543 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms