RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 PIM3Q86V86 326 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 FAM185AQ8N0U4 392 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 DPP10Q8N608 796 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 KDM1BQ8NB78 822 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 SLC25A28Q96A46 364 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 EBF3Q9H4W6 596 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 STN1Q9H668 368 aaKnown RBP3.57□□□□□ -1.84
OTUD4-207ENST00000509517 RRN3Q9NYV6 651 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 TBC1D14Q9P2M4 693 aa3.57□□□□□ -1.84
OTUD4-207ENST00000509517 OR6C68A6NDL8 312 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 GAGE12JA6NER3 117 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 FAM90A7PA6NKC0 464 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 FAM90A22PA8MWA6 464 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 FAM90A12PA8MX19 464 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 FAM90A23PA8MXZ1 464 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 B4DGG1 531 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 NCAM2O15394 837 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 ANP32CO43423 234 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 HBP1O60381 514 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 EIF5BO60841 1220 aaKnown RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 SYF2O95926 243 aaKnown RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 WEE2P0C1S8 567 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 UNGP13051 313 aaPredicted RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TBXAS1P24557 533 aaPredicted RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TNFSF8P32971 234 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 SKIV2L2P42285 1042 aaKnown RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 PTPN9P43378 593 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 POLD2P49005 469 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 CLCNKBP51801 687 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 CHRNDQ07001 517 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 PTGR1Q14914 329 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 SYTL3Q4VX76 610 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TMEM268Q5VZI3 342 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TBC1D9BQ66K14 1250 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 ATG16L1Q676U5 607 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 NAPEPLDQ6IQ20 393 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TRIM74Q86UV6 250 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TRIM73Q86UV7 250 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 WDR5BQ86VZ2 330 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 SMAP1Q8IYB5 467 aaPredicted RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TMEM199Q8N511 208 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 LRRC57Q8N9N7 239 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 SETD9Q8NE22 299 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 LPAR1Q92633 364 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 STAMQ92783 540 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 INPP5DQ92835 1189 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 NPLQ9BXD5 320 aaPredicted RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 B3GNT4Q9C0J1 378 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 FAM234AQ9H0X4 552 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TTC12Q9H892 705 aaPredicted RBP3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TMEM160Q9NX00 188 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 GRHL1Q9NZI5 618 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 FBXO40Q9UH90 709 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 CDH22Q9UJ99 828 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 SUFUQ9UMX1 484 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 DHDHQ9UQ10 334 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 SLC4A4Q9Y6R1 1079 aa3.56□□□□□ -1.84
OTUD4-207ENST00000509517 TARSL2A2RTX5 802 aaKnown RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 SH2D7A6NKC9 451 aaPredicted RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 H3BNX3 289 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 CBX6O95503 412 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 KLKB1P03952 638 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 POLBP06746 335 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 CD72P21854 359 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 CNTFP26441 200 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 MAPK9P45984 424 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 RPE65Q16518 533 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 FBXO43Q4G163 708 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 WDR45BQ5MNZ6 344 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 Q5PR19 223 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 TMEM71Q6P5X7 295 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 PARM1Q6UWI2 310 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 FAM217AQ8IXS0 508 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 LSM14AQ8ND56 463 aaKnown RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 PPM1EQ8WY54 764 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 USP13Q92995 863 aaPredicted RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 SH3KBP1Q96B97 665 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 CLSTN3Q9BQT9 956 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 PHF7Q9BWX1 381 aaPredicted RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 LMAN2LQ9H0V9 348 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 MROH8Q9H579 483 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 CXorf56Q9H5V9 222 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 SIRT3Q9NTG7 399 aaPredicted RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 GGA3Q9NZ52 723 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 WWOXQ9NZC7 414 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 NLKQ9UBE8 527 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 PLEKHB1Q9UF11 243 aaPredicted RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 RAP2CQ9Y3L5 183 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 CLDN16Q9Y5I7 305 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 LRRFIP2Q9Y608 721 aaKnown RBP3.55□□□□□ -1.84
OTUD4-207ENST00000509517 SQORQ9Y6N5 450 aa3.55□□□□□ -1.84
OTUD4-207ENST00000509517 RRN3P2A6NIE6 340 aa3.54□□□□□ -1.84
OTUD4-207ENST00000509517 H0YGN5 161 aa3.54□□□□□ -1.84
OTUD4-207ENST00000509517 RNMTO43148 476 aaKnown RBP3.54□□□□□ -1.84
OTUD4-207ENST00000509517 CREB3O43889 395 aa3.54□□□□□ -1.84
OTUD4-207ENST00000509517 ADAP00813 363 aa3.54□□□□□ -1.84
OTUD4-207ENST00000509517 HOXB2P14652 356 aa3.54□□□□□ -1.84
OTUD4-207ENST00000509517 CHRNB2P17787 502 aa3.54□□□□□ -1.84
OTUD4-207ENST00000509517 RASSF2P50749 326 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms