RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 DPY19L3Q6ZPD9 716 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 PSTKQ8IV42 348 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 OR2T34Q8NGX1 318 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 ISG20Q96AZ6 181 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 CEP44Q9C0F1 390 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 KLC2Q9H0B6 622 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 MIR1-1HGQ9H1L0 117 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 CATSPERBQ9H7T0 1116 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 EBF2Q9HAK2 575 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 CABIN1Q9Y6J0 2220 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 CHD5Q8TDI0 1954 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 RASA4BC9J798 803 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 RASA4O43374 803 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 PRPSAP2O60256 369 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 FSBPO95073 299 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 CD27P26842 260 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 IL1R2P27930 398 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 BNC1Q01954 994 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 CNTN1Q12860 1018 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 PIGHQ14442 188 aaPredicted RBP16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 ARSIQ5FYB1 569 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 DAB2IPQ5VWQ8 1189 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 SARM1Q6SZW1 724 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 PCDH20Q8N6Y1 951 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 OR14C36Q8NHC7 312 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 VOPP1Q96AW1 172 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 KCTD15Q96SI1 283 aaPredicted RBP16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 SNRNP25Q9BV90 132 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 TNKS2Q9H2K2 1166 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 OSGEPQ9NPF4 335 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 AP4E1Q9UPM8 1137 aa16.46■□□□□ 0.23
PDLIM5-212ENST00000509333 SSU72P8A0A1W2PR75 194 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 FAM47DPA6NHR8 397 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 LRRC72A6NJI9 287 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 FGF10O15520 208 aaPredicted RBP16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 SYPP08247 313 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 TCF4P15884 667 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 CCR5P51681 352 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 SLC18A3Q16572 532 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 C22orf39Q6P5X5 142 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 ZCCHC9Q8N567 271 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 ARRDC3Q96B67 414 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 BTBD6Q96KE9 485 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 HEPHQ9BQS7 1158 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 NUP85Q9BW27 656 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 KDM4CQ9H3R0 1056 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 LRRC19Q9H756 370 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 DONSONQ9NYP3 566 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 CWC15Q9P013 229 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 IP6K2Q9UHH9 426 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 FCF1Q9Y324 198 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3DA0A087WVF3 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3IA0A087WXS9 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3EA0A087X179 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3KA0A087X1G2 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 A0A1W2PPC4 97 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3FA6NER0 549 aaPredicted RBP16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3LB9A6J9 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 C1QTNF3-AMACRE9PGA6 284 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 MYO1FO00160 1098 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 EEF2KO00418 725 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 SLC7A4O43246 635 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 PRNPP04156 253 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3HP0C7X1 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 RARAP10276 462 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 ERCC2P18074 760 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 MAPK8P45983 427 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 CSNK1EP49674 416 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 DNA2P51530 1060 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 NDST2P52849 883 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 ADPRHP54922 357 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TAS2R38P59533 333 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TPI1P60174 286 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 FOXK2Q01167 660 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 SERINC3Q13530 473 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TSR1Q2NL82 804 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 POM121L1PQ3SYA9 428 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 INO80DQ53TQ3 878 aaPredicted RBP16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 KCNT1Q5JUK3 1230 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 AGBL4Q5VU57 503 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 AFMIDQ63HM1 303 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3GQ6DHY5 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TXNRD3NBQ6F5E7 133 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3CQ6IPX1 549 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 LEKR1Q6ZMV7 388 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TBC1D3Q8IZP1 549 aaPredicted RBP16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 HMCESQ96FZ2 354 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 CCDC114Q96M63 670 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TRIM5Q9C035 493 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 SLC39A8Q9C0K1 460 aa16.44■□□□□ 0.22
PDLIM5-212ENST00000509333 TM9SF3Q9HD45 589 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms