RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 LRRC69Q6ZNQ3 347 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 SND1Q7KZF4 910 aaKnown RBP eCLIP8.17□□□□□ -1.13e-6■□□□□ 8.1
UBE2D3-222ENST00000508238 APTXQ7Z2E3 356 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 C14orf80Q86SX3 495 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 SETD3Q86TU7 594 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 FAM124AQ86V42 546 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 DHX40Q8IX18 779 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 ZCCHC9Q8N567 271 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 DEFB124Q8NES8 71 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 ANKRD20A12PQ8NF67 263 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 CPA5Q8WXQ8 436 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 BIRC7Q96CA5 298 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 HSH2DQ96JZ2 352 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 RPL10LQ96L21 214 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 ERGIC2Q96RQ1 377 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 HAPLN3Q96S86 360 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 TKTL2Q9H0I9 626 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 VPS16Q9H269 839 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 NEUROG2Q9H2A3 272 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 HSD3B7Q9H2F3 369 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 RETREG1Q9H6L5 497 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 FSCN3Q9NQT6 498 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 ANLNQ9NQW6 1124 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 FAM207AQ9NSI2 230 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 FBXL12Q9NXK8 326 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 COX16Q9P0S2 106 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 VANGL2Q9ULK5 521 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 HS3ST2Q9Y278 367 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 PCDHGB2Q9Y5G2 931 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 AKAP13Q12802 2813 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 FRYQ5TBA9 3013 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 CXorf51AA0A1B0GTR3 108 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 FAM221BA6H8Z2 402 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SOWAHDA6NJG2 315 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 LRRC72A6NJI9 287 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 MCF2LO15068 1137 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 EPHB6O15197 1021 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 ALOX15BO15296 676 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 MID1O15344 667 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SLC7A4O43246 635 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 GFPT2O94808 682 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 CER1O95813 267 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 IGHV4-34P06331 123 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 UNGP13051 313 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SLC8A1P32418 973 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 STAT1P42224 750 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 GRIA4P48058 902 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 STK19P49842 368 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 KLK7P49862 253 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SULT1E1P49888 294 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 IRAK1P51617 712 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 CCR5P51681 352 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 GALCP54803 685 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 GSCP56915 257 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 FMO1Q01740 532 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 NRG1Q02297 640 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 DEUP1Q05D60 604 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 CCDC183Q5T5S1 534 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 TAF3Q5VWG9 929 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 NAA35Q5VZE5 725 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 KIAA0895LQ68EN5 471 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 TRNP1Q6NT89 227 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 LRRC31Q6UY01 552 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF783Q6ZMS7 281 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 DSG4Q86SJ6 1040 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 CACUL1Q86Y37 369 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 MMAAQ8IVH4 418 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 STK40Q8N2I9 435 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 OR52K2Q8NGK3 314 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 OR2I1PQ8NGU4 316 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 OR2T34Q8NGX1 318 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SLC20A1Q8WUM9 679 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 CENPIQ92674 756 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 IFT43Q96FT9 208 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SPAG5Q96R06 1193 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 TBCBQ99426 244 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SIK2Q9H0K1 926 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 MIR1-1HGQ9H1L0 117 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 CUEDC1Q9NWM3 386 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 PPARGC1AQ9UBK2 798 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF212Q9UDV6 495 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SERGEFQ9UGK8 458 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 PPM1HQ9ULR3 514 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 GPC6Q9Y625 555 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 SLCO1B1Q9Y6L6 691 aa8.16□□□□□ -1.1
UBE2D3-222ENST00000508238 A0A1W2PP55 124 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 A0A1W2PPC4 97 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 ILVBLA1L0T0 632 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 C2CD4BA6NLJ0 364 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 VILLO15195 856 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 LATO43561 262 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 DFNA5O60443 496 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 CBFA2T3O75081 653 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 RNASEH2AO75792 299 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 CNTN5O94779 1100 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 TRIM16O95361 564 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 RDXP35241 583 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 ADRA1BP35368 520 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms