RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PRAMEF11O60813 436 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 CD160O95971 181 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 PRNPP04156 253 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 TNNT1P13805 278 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 VAV1P15498 845 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 ZFXP17010 805 aaPredicted RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 CD6P30203 668 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 DNA2P51530 1060 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 SNRPD1P62314 119 aaKnown RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 IL10RBQ08334 325 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 CCDC15Q0P6D6 951 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 RFTN1Q14699 578 aaPredicted RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 PLK5Q496M5 336 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 CARD16Q5EG05 197 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 MMAAQ8IVH4 418 aaKnown RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 ARHGAP12Q8IWW6 846 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 SUMF1Q8NBK3 374 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 OR2A12Q8NGT7 310 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 PCDH19Q8TAB3 1148 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 GANCQ8TET4 914 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 UBE2Q2Q8WVN8 375 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 RAPGEF5Q92565 580 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 FAM129BQ96TA1 746 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 PABPC3Q9H361 631 aaKnown RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 PDFQ9HBH1 243 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 GMEB2Q9UKD1 530 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 CYP8B1Q9UNU6 501 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 INVSQ9Y283 1065 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 FCF1Q9Y324 198 aaKnown RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 CACNA1HO95180 2353 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 MACROD2A1Z1Q3 448 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 CCDC66A2RUB6 948 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 TMCC1O94876 653 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 GSRP00390 522 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 IL1BP01584 269 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 PTMAP06454 111 aaKnown RBP15.27■□□□□ 0.04
RNF4-210ENST00000508235 CHRNA3P32297 505 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 SLC8A1P32418 973 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 PSMD8P48556 350 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 RHOAP61586 193 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 CCZ1BP86790 482 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 CCZ1P86791 482 aaPredicted RBP15.27■□□□□ 0.04
RNF4-210ENST00000508235 PAFAH1B3Q15102 231 aaKnown RBP15.27■□□□□ 0.04
RNF4-210ENST00000508235 TMCO4Q5TGY1 634 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 PMS2CLQ68D20 193 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 NCBP2-AS2Q69YL0 99 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 CACUL1Q86Y37 369 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 KATNAL2Q8IYT4 538 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 RCOR2Q8IZ40 523 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 ATPAF2Q8N5M1 289 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 FAM160A2Q8N612 972 aaPredicted RBP15.27■□□□□ 0.04
RNF4-210ENST00000508235 TMIEQ8NEW7 156 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 OR2AP1Q8NGE2 309 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 NSMCE1Q8WV22 266 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 LRIG1Q96JA1 1093 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 GDAP1L1Q96MZ0 367 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 ZNF599Q96NL3 588 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 RNF157Q96PX1 679 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 PHOX2BQ99453 314 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 OMDQ99983 421 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 TNKS2Q9H2K2 1166 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 IL36AQ9UHA7 158 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 IPO11Q9UI26 975 aaKnown RBP15.27■□□□□ 0.04
RNF4-210ENST00000508235 PPM1HQ9ULR3 514 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 FZD4Q9ULV1 537 aa15.27■□□□□ 0.04
RNF4-210ENST00000508235 PRR23AA6NEV1 266 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 C3orf70A6NLC5 250 aaPredicted RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 J3KR12 359 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 APOL1O14791 398 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 PALMO75781 387 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
RNF4-210ENST00000508235 IGSF6O95976 241 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 MX2P20592 715 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 BCKDHBP21953 392 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 CTNNA1P35221 906 aaKnown RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 DPP6P42658 865 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 RPL6Q02878 288 aaKnown RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 RAD51Q06609 339 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 TIGD7Q6NT04 549 aaPredicted RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 DPY19L3Q6ZPD9 716 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 ZNF662Q6ZS27 426 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 BBS5Q8N3I7 341 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 PIP4K2CQ8TBX8 421 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 FOXJ1Q92949 421 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 PPP1R16AQ96I34 528 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 RBM41Q96IZ5 413 aaKnown RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 ZNF830Q96NB3 372 aaPredicted RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 HEPHQ9BQS7 1158 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 TM6SF2Q9BZW4 377 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 BTBD1Q9H0C5 482 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 PCED1AQ9H1Q7 454 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 DUSP15Q9H1R2 295 aaPredicted RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 GOLPH3Q9H4A6 298 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 SGK2Q9HBY8 427 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 DYRK4Q9NR20 520 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 ETNK2Q9NVF9 386 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 HAUS2Q9NVX0 235 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms