RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SLC18A3Q16572 532 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 FBXO43Q4G163 708 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 EARS2Q5JPH6 523 aaKnown RBP6.4□□□□□ -1.38
HERC4-213ENST00000506515 KIAA1755Q5JYT7 1200 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 FAM171A1Q5VUB5 890 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 AADACL2Q6P093 401 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 LRIG3Q6UXM1 1119 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 CYB5R4Q7L1T6 521 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 PTF1AQ7RTS3 328 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 CHD1LQ86WJ1 897 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 ARMC8Q8IUR7 673 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 GHDCQ8N2G8 530 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 ZNF366Q8N895 744 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 SETD9Q8NE22 299 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 RFFLQ8WZ73 363 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 DPF1Q92782 380 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 FRMD8Q9BZ67 464 aaPredicted RBP6.4□□□□□ -1.38
HERC4-213ENST00000506515 SLC32A1Q9H598 525 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 EPHX3Q9H6B9 360 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 CAMK2AQ9UQM7 478 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 CNPY2Q9Y2B0 182 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 MYO5CQ9NQX4 1742 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 ARHGEF17Q96PE2 2063 aaPredicted RBP6.39□□□□□ -1.39
HERC4-213ENST00000506515 DPPA5A6NC42 116 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 UGDHO60701 494 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 RTN3O95197 1032 aaPredicted RBP6.39□□□□□ -1.39
HERC4-213ENST00000506515 KLRC2P26717 231 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 CIITAP33076 1130 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 C5orf22Q49AR2 442 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 MEX3CQ5U5Q3 659 aaKnown RBP6.39□□□□□ -1.39
HERC4-213ENST00000506515 H1FNTQ75WM6 255 aaPredicted RBP6.39□□□□□ -1.39
HERC4-213ENST00000506515 R3HCC1LQ7Z5L2 792 aaKnown RBP6.39□□□□□ -1.39
HERC4-213ENST00000506515 TNIP2Q8NFZ5 429 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 ZCCHC10Q8TBK6 192 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 RAB40AQ8WXH6 277 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 KIF1BPQ96EK5 621 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 FAM118BQ9BPY3 351 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 IFT27Q9BW83 186 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 SLC25A18Q9H1K4 315 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 ZNF304Q9HCX3 659 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 BEX4Q9NWD9 120 aaPredicted RBP6.39□□□□□ -1.39
HERC4-213ENST00000506515 AASSQ9UDR5 926 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 TROQ12816 1431 aaPredicted RBP6.39□□□□□ -1.39
HERC4-213ENST00000506515 SHANK2Q9UPX8 1470 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 MROH2AA6NES4 1674 aa6.39□□□□□ -1.39
HERC4-213ENST00000506515 OR6C68A6NDL8 312 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 F9P00740 461 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 TUBB4AP04350 444 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 URODP06132 367 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 CHRM4P08173 479 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 SKIV2L2P42285 1042 aaKnown RBP6.38□□□□□ -1.39
HERC4-213ENST00000506515 ARHGAP25P42331 645 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 CPA2P48052 419 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 HMGA2P52926 109 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 GHRHRQ02643 423 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 FOXF2Q12947 444 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 TSTQ16762 297 aaKnown RBP6.38□□□□□ -1.39
HERC4-213ENST00000506515 SLC9C1Q4G0N8 1177 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 ZNF766Q5HY98 468 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 DSTYKQ6XUX3 929 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 C1orf122Q6ZSJ8 110 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 CCDC25Q86WR0 208 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 GALNT16Q8N428 558 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 DNAAF1Q8NEP3 725 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.38□□□□□ -1.39
HERC4-213ENST00000506515 HSPH1Q92598 858 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 ZG16BQ96DA0 208 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 SEMA4BQ9NPR2 832 aaPredicted RBP6.38□□□□□ -1.39
HERC4-213ENST00000506515 ADARB2Q9NS39 739 aaKnown RBP6.38□□□□□ -1.39
HERC4-213ENST00000506515 OLA1Q9NTK5 396 aaKnown RBP6.38□□□□□ -1.39
HERC4-213ENST00000506515 SLC25A10Q9UBX3 287 aaPredicted RBP6.38□□□□□ -1.39
HERC4-213ENST00000506515 UTS2RQ9UKP6 389 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 ICKQ9UPZ9 632 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 NAALADL1Q9UQQ1 740 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 OSGIN2Q9Y236 505 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 COX11Q9Y6N1 276 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 PLEKHH2Q8IVE3 1493 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 KDM5CP41229 1560 aa6.38□□□□□ -1.39
HERC4-213ENST00000506515 TCOF1Q13428 1488 aaKnown RBP6.37□□□□□ -1.39
HERC4-213ENST00000506515 GOLGA6L10A0A0M3HER8 536 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 TARSL2A2RTX5 802 aaKnown RBP6.37□□□□□ -1.39
HERC4-213ENST00000506515 TMEM247A6NEH6 219 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 TEX22C9J3V5 150 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 PPP6CO00743 305 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 CEP104O60308 925 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 LATS1O95835 1130 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 NHLH1Q02575 133 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 PLK5Q496M5 336 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 WDR78Q5VTH9 848 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 FAM57BQ71RH2 274 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 NEK8Q86SG6 692 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 TBC1D1Q86TI0 1168 aaPredicted RBP6.37□□□□□ -1.39
HERC4-213ENST00000506515 CNGA4Q8IV77 575 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 BCAS4Q8TDM0 211 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 NOC3LQ8WTT2 800 aaKnown RBP6.37□□□□□ -1.39
HERC4-213ENST00000506515 DDB2Q92466 427 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 PIMREGQ9BSJ6 248 aa6.37□□□□□ -1.39
HERC4-213ENST00000506515 QTRT1Q9BXR0 403 aaKnown RBP6.37□□□□□ -1.39
HERC4-213ENST00000506515 NLKQ9UBE8 527 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms