RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 RCOR2Q8IZ40 523 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 PLD5Q8N7P1 536 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 ZBTB44Q8NCP5 570 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 FAM126AQ9BYI3 521 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 KCNH6Q9H252 994 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 TRMT1Q9NXH9 659 aaKnown RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 UBA2Q9UBT2 640 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 IPO11Q9UI26 975 aaKnown RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 LAMA1P25391 3075 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 CCDC66A2RUB6 948 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-205ENST00000503401 TAZQ16635 292 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 SLC9A4Q6AI14 798 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 NPNTQ6UXI9 565 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 VSIG1Q86XK7 387 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 ATPAF2Q8N5M1 289 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 FAM160A2Q8N612 972 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-205ENST00000503401 OR2A12Q8NGT7 310 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 EXD1Q8NHP7 514 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 SIPA1Q96FS4 1042 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 FAM129BQ96TA1 746 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 HEMGNQ9BXL5 484 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 PYCARDQ9ULZ3 195 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 HEY1Q9Y5J3 304 aa16.8■□□□□ 0.28
SCLT1-205ENST00000503401 ZNF487B1APH4 448 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 APOL1O14791 398 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 DDX3YO15523 660 aaKnown RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 HRO43593 1189 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 PSMD8P48556 350 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 RWDD2BP57060 319 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 GEMIN4P57678 1058 aaKnown RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 RPS14P62263 151 aaKnown RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 ELAVL3Q14576 367 aaKnown RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 POM121L1PQ3SYA9 428 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 TFDP3Q5H9I0 405 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 ATXN7L2Q5T6C5 722 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 DPY19L3Q6ZPD9 716 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 CHST14Q8NCH0 376 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 OR6K2Q8NGY2 324 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 PRCCQ92733 491 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 RBM41Q96IZ5 413 aaKnown RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 EXOC2Q96KP1 924 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 RSPH9Q9H1X1 276 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 DTLQ9NZJ0 730 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 SAE1Q9UBE0 346 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-205ENST00000503401 PCDHGA2Q9Y5H1 932 aa16.79■□□□□ 0.28
SCLT1-205ENST00000503401 hCG_1818297A0A087WSY0 165 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CCDC163A0A0D9SF12 145 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 RNF103O00237 685 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 MAFKO60675 156 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CST8O60676 142 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 PYGMP11217 842 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 METAP1P53582 386 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 GALNT2Q10471 571 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 ZNF211Q13398 564 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CYTH1Q15438 398 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 PCDH20Q8N6Y1 951 aaKnown RBP16.78■□□□□ 0.28
SCLT1-205ENST00000503401 OR8D1Q8WZ84 308 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 HES6Q96HZ4 224 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 ALS2CR12Q96Q35 445 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 HERPUD2Q9BSE4 406 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CEP44Q9C0F1 390 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 SARDHQ9UL12 918 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CYP8B1Q9UNU6 501 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 THADAQ6YHU6 1953 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 PLXND1Q9Y4D7 1925 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 GON4LQ3T8J9 2241 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CEP192Q8TEP8 1941 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 USP27XA6NNY8 438 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 MID1O15344 667 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 IL1BP01584 269 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CTSLP07711 333 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 GKP32189 559 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 GARSP41250 739 aaKnown RBP16.78■□□□□ 0.28
SCLT1-205ENST00000503401 IL10RBQ08334 325 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 INO80DQ53TQ3 878 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-205ENST00000503401 FAM182AQ5T1J6 154 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 DCAF12L1Q5VU92 463 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 ZNF776Q68DI1 518 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-205ENST00000503401 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 RYBPQ8N488 228 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-205ENST00000503401 UBL4BQ8N7F7 174 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 GRIN3AQ8TCU5 1115 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 HAUS1Q96CS2 278 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 PHOX2BQ99453 314 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 FBRSQ9HAH7 460 aa16.78■□□□□ 0.28
SCLT1-205ENST00000503401 CXorf51AA0A1B0GTR3 108 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 MIF4GDA9UHW6 222 aaKnown RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 PLK4O00444 970 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 MCF2LO15068 1137 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 RNASEH1O60930 286 aaKnown RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 LILRB5O75023 590 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 RPP40O75818 363 aaKnown RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 PEX11BO96011 259 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 ACADMP11310 421 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 PECAM1P16284 738 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 BCKDHBP21953 392 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 RECQLP46063 649 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 TPMTP51580 245 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms