RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 KLHDC8BQ8IXV7 354 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 BBS5Q8N3I7 341 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CNTD1Q8N815 330 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 PPM1NQ8N819 430 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 ARL14EPQ8N8R7 260 aaPredicted RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 ANKRD42Q8N9B4 389 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 TTC16Q8NEE8 873 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 MGARPQ8TDB4 240 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 DCAKDQ8WVC6 231 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 DYDC1Q8WWB3 177 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 SLC44A1Q8WWI5 657 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CDKL2Q92772 493 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 FATE1Q969F0 183 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 WBP2Q969T9 261 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 AZIN2Q96A70 460 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 ZFRQ96KR1 1074 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 SMC6Q96SB8 1091 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 APOL2Q9BQE5 337 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CORO1BQ9BR76 489 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 TRIM56Q9BRZ2 755 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 DHRS4Q9BTZ2 278 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 TRABDQ9H4I3 376 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 RETREG1Q9H6L5 497 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 UBP1Q9NZI7 540 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 BFARQ9NZS9 450 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 AGO1Q9UL18 857 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 AAR2Q9Y312 384 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 SH3BP1Q9Y3L3 701 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 IRAK3Q9Y616 596 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 ZFP37Q9Y6Q3 630 aaPredicted RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 A0A1W2PRU2 124 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ERICH4A6NGS2 130 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM159BA6NKW6 160 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 FOXO6A8MYZ6 492 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 C5orf67F2Z3F1 127 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 J3KR12 359 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SCAMP3O14828 347 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ATP9BO43861 1147 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 TSPAN3O60637 253 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PRAMEF11O60813 436 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PMPCBO75439 489 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PIAS1O75925 651 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 MT-CYBP00156 380 aaPredicted RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 KLKB1P03952 638 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 POLBP06746 335 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 DNAJB1P25685 340 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 HOXD9P28356 352 aaPredicted RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ETFBP38117 255 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 NUMBP49757 651 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 RENBPP51606 427 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 CLCN4P51793 760 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 OXCT1P55809 520 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 MAXP61244 160 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 GNA12Q03113 381 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ITKQ08881 620 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 MPP3Q13368 585 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 HNRNPDQ14103 355 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 LBRQ14739 615 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SMAD1Q15797 465 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PCSK7Q16549 785 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 C6orf132Q5T0Z8 1188 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ADGRF1Q5T601 910 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 MARC1Q5VT66 337 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 TXNDC8Q6A555 127 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 IL31Q6EBC2 164 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 TRMT10BQ6PF06 316 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 LILRA6Q6PI73 481 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ADGRD1Q6QNK2 874 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 GAREM2Q75VX8 874 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PRPF39Q86UA1 669 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 LRRC6Q86X45 466 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 C4orf33Q8N1A6 199 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 MAB21L3Q8N8X9 362 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PPHLN1Q8NEY8 458 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 OR7D4Q8NG98 312 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SPATA22Q8NHS9 363 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ZSCAN18Q8TBC5 510 aaPredicted RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC22A17Q8WUG5 538 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ATXN2LQ8WWM7 1075 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 CERS2Q96G23 380 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SAMD11Q96NU1 681 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC22A12Q96S37 553 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 CINPQ9BW66 212 aaPredicted RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 IL22Q9GZX6 179 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 RNF38Q9H0F5 515 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 MUC3BQ9H195 1237 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC25A51Q9H1U9 297 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 MAGEH1Q9H213 219 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ATXN3LQ9H3M9 355 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 KIF9Q9HAQ2 790 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PDFQ9HBH1 243 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PLAC1Q9HBJ0 212 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 ATP13A1Q9HD20 1204 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 KCNK9Q9NPC2 374 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 GKN1Q9NS71 199 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 INTS9Q9NV88 658 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 NKIRAS1Q9NYS0 192 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms