RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 FRS2Q8WU20 508 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 ISG20Q96AZ6 181 aaKnown RBP16.13■□□□□ 0.17
PMF1-205ENST00000497069 HDAC11Q96DB2 347 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 ERLEC1Q96DZ1 483 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 TSGA13Q96PP4 275 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 HHIPQ96QV1 700 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 CINPQ9BW66 212 aaPredicted RBP16.13■□□□□ 0.17
PMF1-205ENST00000497069 FBRSQ9HAH7 460 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 PDFQ9HBH1 243 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 HAUS2Q9NVX0 235 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 POLR3BQ9NW08 1133 aaPredicted RBP16.13■□□□□ 0.17
PMF1-205ENST00000497069 BCCIPQ9P287 314 aaKnown RBP eCLIP16.13■□□□□ 0.17
PMF1-205ENST00000497069 SAE1Q9UBE0 346 aaPredicted RBP16.13■□□□□ 0.17
PMF1-205ENST00000497069 ACTL7AQ9Y615 435 aa16.13■□□□□ 0.17
PMF1-205ENST00000497069 A0A1W2PQF6 199 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 MATN3O15232 486 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 SIN3BO75182 1162 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 PAPSS2O95340 614 aaPredicted RBP16.12■□□□□ 0.17
PMF1-205ENST00000497069 APBB3O95704 486 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 PECAM1P16284 738 aaPredicted RBP16.12■□□□□ 0.17
PMF1-205ENST00000497069 COL9A1P20849 921 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 CXCR5P32302 372 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 SNRPD1P62314 119 aaKnown RBP16.12■□□□□ 0.17
PMF1-205ENST00000497069 AP1B1Q10567 949 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 CAMK2GQ13555 558 aaPredicted RBP16.12■□□□□ 0.17
PMF1-205ENST00000497069 ZNF235Q14590 738 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 LBRQ14739 615 aaKnown RBP16.12■□□□□ 0.17
PMF1-205ENST00000497069 MARC1Q5VT66 337 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 KIAA1211LQ6NV74 962 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 DSG4Q86SJ6 1040 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 RYBPQ8N488 228 aaPredicted RBP16.12■□□□□ 0.17
PMF1-205ENST00000497069 MAIP1Q8WWC4 291 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 OR8D1Q8WZ84 308 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 PTPRN2Q92932 1015 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 PBKQ96KB5 322 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 OLFM3Q96PB7 478 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 LGMNQ99538 433 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 NAPGQ99747 312 aaPredicted RBP16.12■□□□□ 0.17
PMF1-205ENST00000497069 FERMT1Q9BQL6 677 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 HERPUD2Q9BSE4 406 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 TNKS2Q9H2K2 1166 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 MTG2Q9H4K7 406 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 PRSS16Q9NQE7 514 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 C2orf42Q9NWW7 574 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 SEPT3Q9UH03 358 aa16.12■□□□□ 0.17
PMF1-205ENST00000497069 CTAGE9A4FU28 777 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 MCF2LO15068 1137 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 CD160O95971 181 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 VAV1P15498 845 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 RENBPP51606 427 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 OTUD4Q01804 1114 aaKnown RBP16.11■□□□□ 0.17
PMF1-205ENST00000497069 CSTF1Q05048 431 aaKnown RBP16.11■□□□□ 0.17
PMF1-205ENST00000497069 ZNF33AQ06730 810 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 ELAVL3Q14576 367 aaKnown RBP16.11■□□□□ 0.17
PMF1-205ENST00000497069 NOMO1Q15155 1222 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 CYTH1Q15438 398 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 CARD16Q5EG05 197 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 C9orf64Q5T6V5 341 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 ANO7Q6IWH7 933 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 SLC13A5Q86YT5 568 aaPredicted RBP16.11■□□□□ 0.17
PMF1-205ENST00000497069 OR2AP1Q8NGE2 309 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 TFB1MQ8WVM0 346 aaKnown RBP16.11■□□□□ 0.17
PMF1-205ENST00000497069 HMGB4Q8WW32 186 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 GDAP1L1Q96MZ0 367 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 TM6SF2Q9BZW4 377 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 PRMT8Q9NR22 394 aaPredicted RBP16.11■□□□□ 0.17
PMF1-205ENST00000497069 FBXO4Q9UKT5 387 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 ZDBF2Q9HCK1 2354 aa16.11■□□□□ 0.17
PMF1-205ENST00000497069 HACD1B0YJ81 288 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 H7C0C1 242 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 IGSF6O95976 241 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 GSRP00390 522 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 ACADMP11310 421 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 CCNB1P14635 433 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 HSPA9P38646 679 aaKnown RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 ATP5OP48047 213 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 EIF3EP60228 445 aaKnown RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 PPIDQ08752 370 aaKnown RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 SLC10A7Q0GE19 358 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 XRCC4Q13426 336 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 HNRNPDQ14103 355 aaKnown RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 LONRF2Q1L5Z9 754 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 ZNF776Q68DI1 518 aaPredicted RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 KIAA1324Q6UXG2 1013 aaKnown RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 ZC3H18Q86VM9 953 aaKnown RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 STK40Q8N2I9 435 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 OR2A12Q8NGT7 310 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 ACTL9Q8TC94 416 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 PRCCQ92733 491 aaPredicted RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 FATE1Q969F0 183 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 WDR24Q96S15 920 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 OSBPL9Q96SU4 736 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 SEPT10Q9P0V9 454 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 HECAQ9UBI9 543 aaPredicted RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 SNX12Q9UMY4 172 aa16.1■□□□□ 0.17
PMF1-205ENST00000497069 MUC22E2RYF6 1773 aaPredicted RBP16.1■□□□□ 0.17
PMF1-205ENST00000497069 K7ESF4 209 aa16.09■□□□□ 0.17
PMF1-205ENST00000497069 ALOX15BO15296 676 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms