RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 ETNK1Q9HBU6 452 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 PFDN4Q9NQP4 134 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 BUD23O43709 281 aaKnown RBP9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 PIRTP0C851 137 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 CES1P23141 567 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 IL1R2P27930 398 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 SPRP35270 261 aaPredicted RBP9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 ECT2LQ008S8 904 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 XRCC4Q13426 336 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 BCL7CQ8WUZ0 217 aaPredicted RBP9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 RUBCNQ92622 972 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 TCEAL4Q96EI5 215 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 SPACA7Q96KW9 195 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 FBXO10Q9UK96 956 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 C1orf232A0A0U1RR37 186 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 PRNPP04156 253 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 TCF4P15884 667 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 PECAM1P16284 738 aaPredicted RBP9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 NPY2RP49146 381 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 DLG2Q15700 870 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 DPYSL2Q16555 572 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 SCARA3Q6AZY7 606 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 CREG2Q8IUH2 290 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 OR52K1Q8NGK4 314 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 OR14C36Q8NHC7 312 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 MYO19Q96H55 970 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 BPIFA1Q9NP55 256 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 SPHK2Q9NRA0 654 aa9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 YBX2Q9Y2T7 364 aaKnown RBP9.61□□□□□ -0.87
GAPVD1-219ENST00000495955 DNALI1O14645 258 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TRIM16O95361 564 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ASLP04424 464 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ATF6P18850 670 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 RGS4P49798 205 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 MLLT6P55198 1093 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 SETDB1Q15047 1291 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 FAM109BQ6ICB4 259 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 CES3Q6UWW8 571 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ALLCQ8N6M5 410 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TSTD1Q8NFU3 115 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 CD101Q93033 1021 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 OTUB2Q96DC9 234 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 INTS9Q9NV88 658 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 MYO9BQ13459 2157 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ITGAVP06756 1048 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 IGFBP6P24592 240 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 CCNCP24863 283 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ARL4DP49703 201 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 SLC20A2Q08357 652 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 MPP3Q13368 585 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 NNTQ13423 1086 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 NOMO1Q15155 1222 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 RAET1GQ6H3X3 334 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ANKRD54Q6NXT1 300 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 RTL10Q7L3V2 364 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 HMGB4Q8WW32 186 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 FGF13Q92913 245 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TTC17Q96AE7 1141 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 SLC2A13Q96QE2 648 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 STN1Q9H668 368 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 DNMT3BQ9UBC3 853 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 SLC39A10Q9ULF5 831 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 CHKBQ9Y259 395 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 FSCN2O14926 492 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 STC2O76061 302 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TTC4O95801 387 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 PITX1P78337 314 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 CDK18Q07002 472 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 LONRF1Q17RB8 773 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TTC19Q6DKK2 380 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 PCDH19Q8TAB3 1148 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 P2RY13Q9BPV8 354 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 FAM167BQ9BTA0 163 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 MAGEB16A2A368 324 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 GOLGA8RI6L899 631 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ELFN1P0C7U0 828 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 LRRC32Q14392 662 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TCEA2Q15560 299 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ARMC6Q6NXE6 501 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 NLRP9Q7RTR0 991 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 ZNF366Q8N895 744 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 LRRC57Q8N9N7 239 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 HEPHQ9BQS7 1158 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 NAT9Q9BTE0 207 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 SLC7A5P2Q9GIP4 190 aa9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 TRMT6Q9UJA5 497 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-219ENST00000495955 KIAA1217Q5T5P2 1943 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TROVE2P10155 538 aaKnown RBP eCLIP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 RPL22P35268 128 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 IL10RBQ08334 325 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TEX44Q53QW1 395 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 STXBP5Q5T5C0 1151 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 CCNI2Q6ZMN8 369 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms