RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SLC25A11Q02978 314 aaKnown RBP16.25■□□□□ 0.19
LIME1-209ENST00000494776 POM121L1PQ3SYA9 428 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 DCAF12L1Q5VU92 463 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 TXNRD3NBQ6F5E7 133 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 SPC24Q8NBT2 197 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 OR2A12Q8NGT7 310 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 PIP4K2CQ8TBX8 421 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 RFFLQ8WZ73 363 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 MIR1-1HGQ9H1L0 117 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 NOL6Q9H6R4 1146 aaKnown RBP16.25■□□□□ 0.19
LIME1-209ENST00000494776 DYRK4Q9NR20 520 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 PILRBQ9UKJ0 227 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 FZD4Q9ULV1 537 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 ACTL7AQ9Y615 435 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 PLXND1Q9Y4D7 1925 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 METTL12A8MUP2 240 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 PRR5-ARHGAP8B1AHC4 643 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 DFFAO00273 331 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
LIME1-209ENST00000494776 PRNPP04156 253 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 CFIP05156 583 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 GNSP15586 552 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 MAOBP27338 520 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 ARHGAP25P42331 645 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 NOP2P46087 812 aaKnown RBP16.24■□□□□ 0.19
LIME1-209ENST00000494776 ARHGAP8P85298 464 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 SERINC3Q13530 473 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 TRIM61Q5EBN2 209 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 CARD16Q5EG05 197 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.24■□□□□ 0.19
LIME1-209ENST00000494776 DPY19L3Q6ZPD9 716 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 RABEPKQ7Z6M1 372 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 TMTC1Q8IUR5 882 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 AADATQ8N5Z0 425 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 KCTD6Q8NC69 237 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 OR14C36Q8NHC7 312 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 CEP76Q8TAP6 659 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 ISG20Q96AZ6 181 aaKnown RBP16.24■□□□□ 0.19
LIME1-209ENST00000494776 NUSAP1Q9BXS6 441 aaKnown RBP16.24■□□□□ 0.19
LIME1-209ENST00000494776 TM6SF2Q9BZW4 377 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 SLC39A8Q9C0K1 460 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 PCED1AQ9H1Q7 454 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 C6orf106Q9H6K1 298 aaPredicted RBP16.24■□□□□ 0.19
LIME1-209ENST00000494776 PCDH18Q9HCL0 1135 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 TMEM74BQ9NUR3 256 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 SERGEFQ9UGK8 458 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 IL36AQ9UHA7 158 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 SARDHQ9UL12 918 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 PPM1HQ9ULR3 514 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 GPR179Q6PRD1 2367 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 OTOGLQ3ZCN5 2332 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 SPTBN4Q9H254 2564 aa16.24■□□□□ 0.19
LIME1-209ENST00000494776 SDK1Q7Z5N4 2213 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.23■□□□□ 0.19
LIME1-209ENST00000494776 SOWAHDA6NJG2 315 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 PATE3B3GLJ2 98 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 FSBPO95073 299 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 KRT7P08729 469 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 AMPD1P23109 780 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 CDC25BP30305 580 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 MAN1A1P33908 653 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 HOXD12P35452 270 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 PAPOLAP51003 745 aaKnown RBP16.23■□□□□ 0.19
LIME1-209ENST00000494776 SNRPD1P62314 119 aaKnown RBP16.23■□□□□ 0.19
LIME1-209ENST00000494776 CCDC15Q0P6D6 951 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 DPYSQ14117 519 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 DUOXA1Q1HG43 343 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 ARSIQ5FYB1 569 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 TCEAL6Q6IPX3 200 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 TMCO3Q6UWJ1 677 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 MAP7D3Q8IWC1 876 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 LZTR1Q8N653 840 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 CHST14Q8NCH0 376 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 TMIEQ8NEW7 156 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 GRIN3AQ8TCU5 1115 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 CASKIN2Q8WXE0 1202 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 TCEAL3Q969E4 200 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 PPP1R16AQ96I34 528 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 CSPG4P5Q96PW8 444 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 HEPHQ9BQS7 1158 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 CALN1Q9BXU9 219 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 KLC2Q9H0B6 622 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 ZDHHC6Q9H6R6 413 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 LRRC19Q9H756 370 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 IMPACTQ9P2X3 320 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 HECAQ9UBI9 543 aaPredicted RBP16.23■□□□□ 0.19
LIME1-209ENST00000494776 UBA2Q9UBT2 640 aaPredicted RBP16.23■□□□□ 0.19
LIME1-209ENST00000494776 SUSD2Q9UGT4 822 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 PCDHA13Q9Y5I0 950 aa16.23■□□□□ 0.19
LIME1-209ENST00000494776 EPN1Q9Y6I3 576 aaPredicted RBP16.23■□□□□ 0.19
LIME1-209ENST00000494776 PLK4O00444 970 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 ZNF821O75541 412 aaPredicted RBP16.22■□□□□ 0.19
LIME1-209ENST00000494776 TMCC1O94876 653 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 CD160O95971 181 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 CTSLP07711 333 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 CCNHP51946 323 aaPredicted RBP16.22■□□□□ 0.19
LIME1-209ENST00000494776 TAS2R40P59535 323 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 RHOAP61586 193 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms