RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 FAM46CQ5VWP2 391 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 USP30Q70CQ3 517 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 KBTBD6Q86V97 674 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 LRRC49Q8IUZ0 686 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 MMAAQ8IVH4 418 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 ARHGAP12Q8IWW6 846 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 PLPP6Q8IY26 295 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 KATNAL2Q8IYT4 538 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 STK40Q8N2I9 435 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 ATPAF2Q8N5M1 289 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 RNF10Q8N5U6 811 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 OR2A12Q8NGT7 310 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 PCDH19Q8TAB3 1148 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 RAPGEF5Q92565 580 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 RBM41Q96IZ5 413 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 ZC3H10Q96K80 434 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 ZNF830Q96NB3 372 aaPredicted RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 MAK16Q9BXY0 300 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 SLC39A8Q9C0K1 460 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 KLC2Q9H0B6 622 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 PABPC3Q9H361 631 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 GOLPH3Q9H4A6 298 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 MTG2Q9H4K7 406 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 PDFQ9HBH1 243 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 ITM2CQ9NQX7 267 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 UBA2Q9UBT2 640 aaPredicted RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 SALL4Q9UJQ4 1053 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 CYP8B1Q9UNU6 501 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 NCKAP1Q9Y2A7 1128 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 FCF1Q9Y324 198 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 HYOU1Q9Y4L1 999 aa10.18□□□□□ -0.78
MACF1-222ENST00000494012 TNRC6BQ9UPQ9 1833 aaKnown RBP10.18□□□□□ -0.78
MACF1-222ENST00000494012 IGHV1OR15-9A0A0B4J2B8 117 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 NDUFS2O75306 463 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 TMCC1O94876 653 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 IGSF6O95976 241 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 GSRP00390 522 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 PRNPP04156 253 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 ZFXP17010 805 aaPredicted RBP10.17□□□□□ -0.78
MACF1-222ENST00000494012 MX2P20592 715 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 CD6P30203 668 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 CTNNA1P35221 906 aaKnown RBP10.17□□□□□ -0.78
MACF1-222ENST00000494012 PSMD8P48556 350 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 DNA2P51530 1060 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 RHOAP61586 193 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 SNRPD1P62314 119 aaKnown RBP10.17□□□□□ -0.78
MACF1-222ENST00000494012 RPL6Q02878 288 aaKnown RBP10.17□□□□□ -0.78
MACF1-222ENST00000494012 CCDC15Q0P6D6 951 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 MMRN1Q13201 1228 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 PAFAH1B3Q15102 231 aaKnown RBP10.17□□□□□ -0.78
MACF1-222ENST00000494012 CARD16Q5EG05 197 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 TMCO4Q5TGY1 634 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 NCBP2-AS2Q69YL0 99 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 LAIR1Q6GTX8 287 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 ZNF662Q6ZS27 426 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 LPCAT2Q7L5N7 544 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 PEX26Q7Z412 305 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 BBS5Q8N3I7 341 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 LRRC57Q8N9N7 239 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 SUMF1Q8NBK3 374 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 OR2AP1Q8NGE2 309 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 EXD1Q8NHP7 514 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 GANCQ8TET4 914 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 NSMCE1Q8WV22 266 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 RLN3Q8WXF3 142 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 PPP1R16AQ96I34 528 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 LRIG1Q96JA1 1093 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 LOXL4Q96JB6 756 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 PDLIM2Q96JY6 352 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 GDAP1L1Q96MZ0 367 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 ZNF599Q96NL3 588 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 RNF157Q96PX1 679 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 FAM129BQ96TA1 746 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 OMDQ99983 421 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 TNKS2Q9H2K2 1166 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 ETNK2Q9NVF9 386 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 HAUS2Q9NVX0 235 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 IL36AQ9UHA7 158 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 IPO11Q9UI26 975 aaKnown RBP10.17□□□□□ -0.78
MACF1-222ENST00000494012 PPM1HQ9ULR3 514 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 FZD4Q9ULV1 537 aa10.17□□□□□ -0.78
MACF1-222ENST00000494012 MYO15AQ9UKN7 3530 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 ANKRD36A6QL64 1941 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 GRID2IPA4D2P6 1211 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 PRR23AA6NEV1 266 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 C3orf70A6NLC5 250 aaPredicted RBP10.16□□□□□ -0.78
MACF1-222ENST00000494012 MIF4GDA9UHW6 222 aaKnown RBP10.16□□□□□ -0.78
MACF1-222ENST00000494012 J3KR12 359 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 APOL1O14791 398 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 MID1O15344 667 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 SLC7A4O43246 635 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 MFSD11O43934 449 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 PALMO75781 387 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 RNASEH2AO75792 299 aaKnown RBP10.16□□□□□ -0.78
MACF1-222ENST00000494012 ZRANB2O95218 330 aaKnown RBP eCLIP10.16□□□□□ -0.78
MACF1-222ENST00000494012 CD160O95971 181 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 CHRNA3P32297 505 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 SLC8A1P32418 973 aa10.16□□□□□ -0.78
MACF1-222ENST00000494012 DPP6P42658 865 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms