RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 OSGEPQ9NPF4 335 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 TM7SF3Q9NS93 570 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 TMEM248Q9NWD8 314 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 FZD10Q9ULW2 581 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 FCF1Q9Y324 198 aaKnown RBP12.89□□□□□ -0.35
HSPG2-212ENST00000493940 WASF2Q9Y6W5 498 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 CELSR3Q9NYQ7 3312 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3DA0A087WVF3 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3IA0A087WXS9 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3EA0A087X179 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3KA0A087X1G2 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3FA6NER0 549 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 C1QTNF9BB2RNN3 333 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3LB9A6J9 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 LATO43561 262 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 PLRG1O43660 514 aaKnown RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3HP0C7X1 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 C1QTNF9P0C862 333 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 PRKCIP41743 596 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 CTSKP43235 329 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 GRIA4P48058 902 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 AFF3P51826 1226 aaKnown RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 KRT83P78385 493 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 SIM1P81133 766 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 IL9RQ01113 521 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 SCAPQ12770 1279 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 C6orf118Q5T5N4 469 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 HGSNATQ68CP4 663 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3GQ6DHY5 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3CQ6IPX1 549 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 RWDD4Q6NW29 188 aaKnown RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 DNAJC24Q6P3W2 148 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 SCYL2Q6P3W7 929 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 SLCO6A1Q86UG4 719 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D3Q8IZP1 549 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 PNPLA1Q8N8W4 532 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 NTAN1Q96AB6 310 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 C2orf49Q9BVC5 232 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 TMEM121BQ9BXQ6 578 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 ATP13A1Q9HD20 1204 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 MYO6Q9UM54 1294 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 ZFR2Q9UPR6 939 aaKnown RBP12.88□□□□□ -0.35
HSPG2-212ENST00000493940 PAXBP1Q9Y5B6 917 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 FREM2Q5SZK8 3169 aa12.88□□□□□ -0.35
HSPG2-212ENST00000493940 LAMA5O15230 3695 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 LRRC72A6NJI9 287 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 HYAL3O43820 417 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-212ENST00000493940 LEFTY1O75610 366 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 FTLP02792 175 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-212ENST00000493940 TCF4P15884 667 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 RHOQP17081 205 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 SERPINH1P50454 418 aaKnown RBP12.87□□□□□ -0.35
HSPG2-212ENST00000493940 CCR5P51681 352 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 RACK1P63244 317 aaKnown RBP12.87□□□□□ -0.35
HSPG2-212ENST00000493940 ASIC2Q16515 512 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 ZNF423Q2M1K9 1284 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 SFMBT2Q5VUG0 894 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 SLFN11Q7Z7L1 901 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
HSPG2-212ENST00000493940 NAXDQ8IW45 347 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 OR6K2Q8NGY2 324 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 BAHD1Q8TBE0 780 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-212ENST00000493940 GRIN3AQ8TCU5 1115 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 PPP1R9BQ96SB3 815 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 CNPY3Q9BT09 278 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 SCNM1Q9BWG6 230 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 ZDHHC5Q9C0B5 715 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 TOR4AQ9NXH8 423 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 ZMIZ1Q9ULJ6 1067 aa12.87□□□□□ -0.35
HSPG2-212ENST00000493940 ASXL3Q9C0F0 2248 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 CACNA1GO43497 2377 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TMEM191CA6NGB0 347 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 KPNA3O00505 521 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-212ENST00000493940 VILLO15195 856 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 ALOX15BO15296 676 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 SERPINC1P01008 464 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 L1CAMP32004 1257 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 SLC14A1Q13336 389 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 FGL2Q14314 439 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TRIP6Q15654 476 aaKnown RBP12.86□□□□□ -0.35
HSPG2-212ENST00000493940 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 ARL13BQ3SXY8 428 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 ACBD5Q5T8D3 534 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-212ENST00000493940 ZNF783Q6ZMS7 281 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 KDM7AQ6ZMT4 941 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TP53INP2Q8IXH6 220 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 CHCHD4Q8N4Q1 142 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 VCPIP1Q96JH7 1222 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TM6SF2Q9BZW4 377 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 KLK13Q9UKR3 277 aa12.86□□□□□ -0.35
HSPG2-212ENST00000493940 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms