RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PIP4K2CQ8TBX8 421 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 PYROXD1Q8WU10 500 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 TTC9Q92623 222 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 PABPC5Q96DU9 382 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 NOX5Q96PH1 765 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CDCA3Q99618 268 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 SELENOSQ9BQE4 189 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 RXFP1Q9HBX9 757 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 MTRRQ9UBK8 725 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 NXF1Q9UBU9 619 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 TYW5A2RUC4 315 aaKnown RBP11.81□□□□□ -0.52
BRCA1-222ENST00000493919 SH3D21A4FU49 640 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 E7EVH7 732 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 H3BQ06 376 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-222ENST00000493919 H7C4K7 107 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 TNFRSF10BO14763 440 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 ADAM12O43184 909 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 TBX10O75333 385 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 VNN1O95497 513 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 GLP2RO95838 553 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 GLUD1P00367 558 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 ADSLP30566 484 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-222ENST00000493919 OR1D2P34982 312 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 PTPN9P43378 593 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 EIF2B2P49770 351 aaKnown RBP11.81□□□□□ -0.52
BRCA1-222ENST00000493919 BCAP31P51572 246 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 TNNC1P63316 161 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 SCRN3Q0VDG4 424 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 DHX34Q14147 1143 aaKnown RBP11.81□□□□□ -0.52
BRCA1-222ENST00000493919 CLUL1Q15846 466 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 SLC14A2Q15849 920 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 WDR72Q3MJ13 1102 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 WSCD1Q658N2 575 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 KRT39Q6A163 491 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 BNIPLQ7Z465 357 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 FRMD5Q7Z6J6 570 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 HEATR4Q86WZ0 1026 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 METTL23Q86XA0 190 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 TICAM1Q8IUC6 712 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 EFHBQ8N7U6 833 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 ATAD1Q8NBU5 361 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 RBBP8NLQ8NC74 664 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-222ENST00000493919 VN1R2Q8NFZ6 395 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 TAS1R2Q8TE23 839 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 RASSF5Q8WWW0 418 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 GATA6Q92908 595 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 SLC35C1Q96A29 364 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 OPALINQ96PE5 141 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 ZPBPQ9BS86 351 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 UBE2ZQ9H832 354 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-222ENST00000493919 TMEM8AQ9HCN3 771 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 SELENONQ9NZV5 590 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
BRCA1-222ENST00000493919 CTAGE15A4D2H0 777 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CCT8L1PA6NM43 557 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CAPN14A8MX76 684 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 BET1O15155 118 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 SLC22A1O15245 554 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 RAD51BO15315 384 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ADAM11O75078 769 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 BAG2O95816 211 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GUCA1CO95843 209 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 SPATA31D3P0C874 917 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 UBTFL6P0CB48 400 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CTAGE8P0CG41 777 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 TYMPP19971 482 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 NUDT1P36639 197 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CLCN4P51793 760 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 MYL7Q01449 175 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 DLX2Q07687 328 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GEN1Q17RS7 908 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 KCNT1Q5JUK3 1230 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 C6orf132Q5T0Z8 1188 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 RSPO2Q6UXX9 243 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 B3GNT6Q6ZMB0 384 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 SPATA31D4Q6ZUB0 917 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ADAMTSL2Q86TH1 951 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CTAGE6Q86UF2 777 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 LONP2Q86WA8 852 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 HID1Q8IV36 788 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CTAGE4Q8IX94 777 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ADGRF2Q8IZF7 708 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 TEX47Q8TBZ9 253 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 FANK1Q8TC84 345 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 HLA-CQ95604 372 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 FRMD6Q96NE9 622 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CLSTN3Q9BQT9 956 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 PI4K2AQ9BTU6 479 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 PPARGC1AQ9UBK2 798 aaKnown RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 POLIQ9UNA4 740 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 CACNG2Q9Y698 323 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 FUOMA2VDF0 154 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 TGM5O43548 720 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GMNNO75496 209 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms