RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CSF2P04141 144 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 KRT5P13647 590 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 CLCN6P51797 869 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 PDCLQ13371 301 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 C5orf22Q49AR2 442 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 ZNF542PQ5EBM4 170 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 SEL1L3Q68CR1 1132 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 KIAA1161Q6NSJ0 714 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 RBM44Q6ZP01 1051 aaKnown RBP18.08■□□□□ 0.48
NUP50-218ENST00000493456 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 ARHGEF19Q8IW93 802 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 ARL14Q8N4G2 192 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 ATXN7L3BQ96GX2 97 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 SALL4Q9UJQ4 1053 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 ENTPD2Q9Y5L3 495 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 HS3ST4Q9Y661 456 aa18.08■□□□□ 0.48
NUP50-218ENST00000493456 COL27A1Q8IZC6 1860 aaPredicted RBP18.07■□□□□ 0.48
NUP50-218ENST00000493456 TDRD6O60522 2096 aaKnown RBP18.07■□□□□ 0.48
NUP50-218ENST00000493456 SYNJ2BP-COX16A0A087WUM0 186 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 SPTY2D1-AS1A0A0U1RR47 76 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 EME2A4GXA9 379 aaPredicted RBP18.07■□□□□ 0.48
NUP50-218ENST00000493456 CDRT15L2A8MXV6 281 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 PSMA7O14818 248 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 HSF2BPO75031 334 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 MT-CO1P00395 513 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 RABIFP47224 123 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 IRAK1P51617 712 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 RPS21P63220 83 aaKnown RBP18.07■□□□□ 0.48
NUP50-218ENST00000493456 STIM1Q13586 685 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 FZD2Q14332 565 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 CDKN3Q16667 212 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 OR6B2Q6IFH4 312 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 GUSBP11Q6P575 273 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 CCDC81Q6ZN84 652 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 EFL1Q7Z2Z2 1120 aaKnown RBP18.07■□□□□ 0.48
NUP50-218ENST00000493456 DEFB106AQ8N104 65 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 WDR48Q8TAF3 677 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 ZNF606Q8WXB4 792 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 BMFQ96LC9 184 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 KREMEN1Q96MU8 473 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 PSMB7Q99436 277 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.07■□□□□ 0.48
NUP50-218ENST00000493456 COX16Q9P0S2 106 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 IL36AQ9UHA7 158 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 VPS51Q9UID3 782 aa18.07■□□□□ 0.48
NUP50-218ENST00000493456 A0A1W2PNU3 283 aaPredicted RBP18.06■□□□□ 0.48
NUP50-218ENST00000493456 CYSRT1A8MQ03 144 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 TPP1O14773 563 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 AQP9O43315 295 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 LETM1O95202 739 aaPredicted RBP18.06■□□□□ 0.48
NUP50-218ENST00000493456 SMC2O95347 1197 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 RHOCP08134 193 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 RECQLP46063 649 aaPredicted RBP18.06■□□□□ 0.48
NUP50-218ENST00000493456 NEK3P51956 506 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 NR0B2Q15466 257 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 TAF5Q15542 800 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 EFHC1Q5JVL4 640 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 KIAA1614Q5VZ46 1190 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 CLEC14AQ86T13 490 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 DCAF4L2Q8NA75 395 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 EHBP1Q8NDI1 1231 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 WDR36Q8NI36 951 aaKnown RBP18.06■□□□□ 0.48
NUP50-218ENST00000493456 PRR11Q96HE9 360 aaPredicted RBP18.06■□□□□ 0.48
NUP50-218ENST00000493456 FEM1CQ96JP0 617 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 SLC17A9Q9BYT1 436 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 CAAP1Q9H8G2 361 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
NUP50-218ENST00000493456 CPED1A4D0V7 1026 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 POM121BA6NF01 834 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 THAP12O43422 761 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 SNAP91O60641 907 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 RRM1P23921 792 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 GNA15P30679 374 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
NUP50-218ENST00000493456 ARSIQ5FYB1 569 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 C22orf39Q6P5X5 142 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 SETD3Q86TU7 594 aaPredicted RBP18.05■□□□□ 0.48
NUP50-218ENST00000493456 CHST14Q8NCH0 376 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 SPATA20Q8TB22 786 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 GRIN3AQ8TCU5 1115 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 GLMNQ92990 594 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 DHTKD1Q96HY7 919 aaPredicted RBP18.05■□□□□ 0.48
NUP50-218ENST00000493456 IL12RB2Q99665 862 aa18.05■□□□□ 0.48
NUP50-218ENST00000493456 PYCARD-AS1I3L0S3 204 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 K7ERQ8 282 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 FPGTO14772 594 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 AP1G1O43747 822 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 PAGE1O75459 146 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 LEFTY1O75610 366 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 PAK4O96013 591 aaPredicted RBP18.04■□□□□ 0.48
NUP50-218ENST00000493456 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
NUP50-218ENST00000493456 ITGA2BP08514 1039 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 ADRB3P13945 408 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 JUNDP17535 347 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 ITGB7P26010 798 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 GGCXP38435 758 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 PPP1R2P41236 205 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 RPIAP49247 311 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 CSRP3P50461 194 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 NME3Q13232 169 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms