RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 IGHV1OR15-9A0A0B4J2B8 117 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 MID1O15344 667 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 KRT86O43790 486 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 PRAMEF11O60813 436 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 TMCC1O94876 653 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 ZRANB2O95218 330 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCM2-217ENST00000492883 CCDC175P0C221 793 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 C5AR1P21730 350 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 BCKDHBP21953 392 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 CD6P30203 668 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 CHRNA3P32297 505 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 PLK5Q496M5 336 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 FAM46CQ5VWP2 391 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 DPY19L3Q6ZPD9 716 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 LPCAT2Q7L5N7 544 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 TP53INP2Q8IXH6 220 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 SYCE1Q8N0S2 351 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 SUMF1Q8NBK3 374 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 TOE1Q96GM8 510 aaKnown RBP14.23□□□□□ -0.13
CCM2-217ENST00000492883 RNF157Q96PX1 679 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 OMDQ99983 421 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 TM6SF2Q9BZW4 377 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 PABPC3Q9H361 631 aaKnown RBP14.23□□□□□ -0.13
CCM2-217ENST00000492883 CD93Q9NPY3 652 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 FBXL12Q9NXK8 326 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 USP36Q9P275 1121 aaKnown RBP14.23□□□□□ -0.13
CCM2-217ENST00000492883 HECAQ9UBI9 543 aaPredicted RBP14.23□□□□□ -0.13
CCM2-217ENST00000492883 IPO11Q9UI26 975 aaKnown RBP14.23□□□□□ -0.13
CCM2-217ENST00000492883 MBD1Q9UIS9 605 aaPredicted RBP14.23□□□□□ -0.13
CCM2-217ENST00000492883 GUCA1BQ9UMX6 200 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 ZNF318Q5VUA4 2279 aa14.23□□□□□ -0.13
CCM2-217ENST00000492883 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 GRID2IPA4D2P6 1211 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 C1QTNF3-AMACRE9PGA6 284 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 ALOX15BO15296 676 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 ZNF821O75541 412 aaPredicted RBP14.22□□□□□ -0.13
CCM2-217ENST00000492883 PALMO75781 387 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 ADH1BP00325 375 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 PLA2G5P39877 138 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 RHOAP61586 193 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 SNRPD1P62314 119 aaKnown RBP14.22□□□□□ -0.13
CCM2-217ENST00000492883 RPL6Q02878 288 aaKnown RBP14.22□□□□□ -0.13
CCM2-217ENST00000492883 IL10RBQ08334 325 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
CCM2-217ENST00000492883 CYTH1Q15438 398 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 POM121L1PQ3SYA9 428 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 NCBP2-AS2Q69YL0 99 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 MFSD7Q6UXD7 560 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 ARHGAP36Q6ZRI8 547 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 PEX26Q7Z412 305 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 RFX6Q8HWS3 928 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 CCDC50Q8IVM0 306 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 TMEFF1Q8IYR6 380 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 RCOR2Q8IZ40 523 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 HDDC3Q8N4P3 179 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 ATPAF2Q8N5M1 289 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 RNF10Q8N5U6 811 aaKnown RBP14.22□□□□□ -0.13
CCM2-217ENST00000492883 DEFB119Q8N690 84 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 PQLC3Q8N755 202 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 CHST14Q8NCH0 376 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 PIP4K2CQ8TBX8 421 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 NSMCE1Q8WV22 266 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 FAF2Q96CS3 445 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 ZC3H10Q96K80 434 aaKnown RBP14.22□□□□□ -0.13
CCM2-217ENST00000492883 HEPHQ9BQS7 1158 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 DUSP15Q9H1R2 295 aaPredicted RBP14.22□□□□□ -0.13
CCM2-217ENST00000492883 PDFQ9HBH1 243 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 IL36AQ9UHA7 158 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 GMEB2Q9UKD1 530 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 AMFRQ9UKV5 643 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 PPM1HQ9ULR3 514 aa14.22□□□□□ -0.13
CCM2-217ENST00000492883 A0A1W2PP55 124 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 C3orf70A6NLC5 250 aaPredicted RBP14.21□□□□□ -0.13
CCM2-217ENST00000492883 ZNF487B1APH4 448 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 KPNA3O00505 521 aaPredicted RBP14.21□□□□□ -0.13
CCM2-217ENST00000492883 APOL1O14791 398 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 RNASEH2AO75792 299 aaKnown RBP14.21□□□□□ -0.13
CCM2-217ENST00000492883 PRNPP04156 253 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 C7P10643 843 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 ZFXP17010 805 aaPredicted RBP14.21□□□□□ -0.13
CCM2-217ENST00000492883 CCNHP51946 323 aaPredicted RBP14.21□□□□□ -0.13
CCM2-217ENST00000492883 RAD51Q06609 339 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 RFTN1Q14699 578 aaPredicted RBP14.21□□□□□ -0.13
CCM2-217ENST00000492883 ARSIQ5FYB1 569 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 PMS2CLQ68D20 193 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 LAIR1Q6GTX8 287 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 USP30Q70CQ3 517 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 ASCL5Q7RTU5 278 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 VSIG1Q86XK7 387 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 LRRC49Q8IUZ0 686 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 PLPP6Q8IY26 295 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 KATNAL2Q8IYT4 538 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 LRRC57Q8N9N7 239 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 TMIEQ8NEW7 156 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 OR2AP1Q8NGE2 309 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 GRIN3AQ8TCU5 1115 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 KRT35Q92764 455 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 HINFPQ9BQA5 517 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 GPR174Q9BXC1 333 aa14.21□□□□□ -0.13
CCM2-217ENST00000492883 BTBD1Q9H0C5 482 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms