RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 NUMBP49757 651 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 NDUFA8P51970 172 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 PDX1P52945 283 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 LRMPQ12912 555 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 KLRB1Q12918 225 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 NNTQ13423 1086 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 ELAVL3Q14576 367 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 CNGA2Q16280 664 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 RNF219Q5W0B1 726 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 CCDC117Q8IWD4 279 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 SMYD4Q8IYR2 804 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 LGI2Q8N0V4 545 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 WDR48Q8TAF3 677 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 FRS2Q8WU20 508 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 HSFY1Q96LI6 401 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 SERPINB11Q96P15 392 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 DUSP23Q9BVJ7 150 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 NAALADL1Q9UQQ1 740 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 DMTF1Q9Y222 760 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 CA5BQ9Y2D0 317 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 NYNRINQ9P2P1 1898 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 M0QYV0 167 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 PLD2O14939 933 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 FBXO21O94952 628 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 TACR2P21452 398 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 NUDT1P36639 197 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 SYKP43405 635 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 CNTN1Q12860 1018 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 STAT4Q14765 748 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 NAA30Q147X3 362 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 AGBL4Q5VU57 503 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 TCERG1LQ5VWI1 586 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 SYPL2Q5VXT5 272 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 RAP1GAP2Q684P5 730 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 TMEM270Q6UE05 265 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 TAC4Q86UU9 113 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 TRIM69Q86WT6 500 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 HEATR4Q86WZ0 1026 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 MIS12Q9H081 205 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 CAAP1Q9H8G2 361 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 UCKL1Q9NWZ5 548 aa12.02□□□□□ -0.49
CACNA1C-228ENST00000492150 PRAMEF26H0Y7S4 382 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 SLC7A4O43246 635 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 PDGFRAP16234 1089 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 TBXAS1P24557 533 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 BRD2P25440 801 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 RPL34P49207 117 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 SLC12A1Q13621 1099 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 POM121L1PQ3SYA9 428 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 ZC3H12AQ5D1E8 599 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 DCAF17Q5H9S7 520 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 KRBA2Q6ZNG9 492 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 TIPARPQ7Z3E1 657 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 VASH2Q86V25 355 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 DTX1Q86Y01 620 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 ARRDC3Q96B67 414 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 KLHDC7BQ96G42 594 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 CATSPER2Q96P56 530 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 NCKIPSDQ9NZQ3 722 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 PPM1HQ9ULR3 514 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 PCDHB4Q9Y5E5 795 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 SHANK1Q9Y566 2161 aa12.01□□□□□ -0.49
CACNA1C-228ENST00000492150 ANKHD1Q8IWZ3 2542 aaKnown RBP12□□□□□ -0.49
CACNA1C-228ENST00000492150 SLC16A3O15427 465 aaKnown RBP12□□□□□ -0.49
CACNA1C-228ENST00000492150 FFAR2O15552 330 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 NNMTP40261 264 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
CACNA1C-228ENST00000492150 PLK1P53350 603 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 MLLT10P55197 1068 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 TAS2R38P59533 333 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 SULT2A1Q06520 285 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 KCNMA1Q12791 1236 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 STILQ15468 1287 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 SETMARQ53H47 684 aaPredicted RBP12□□□□□ -0.49
CACNA1C-228ENST00000492150 FAM46CQ5VWP2 391 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 CHSY1Q86X52 802 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 CIR1Q86X95 450 aaPredicted RBP12□□□□□ -0.49
CACNA1C-228ENST00000492150 FAM114A1Q8IWE2 563 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 CCAR2Q8N163 923 aaKnown RBP12□□□□□ -0.49
CACNA1C-228ENST00000492150 TMEM145Q8NBT3 493 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 OR8D1Q8WZ84 308 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 KAT5Q92993 513 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 SNX21Q969T3 373 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 SLC35C1Q96A29 364 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 FAM149B1Q96BN6 582 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 ALG14Q96F25 216 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 PRMT1Q99873 361 aaKnown RBP12□□□□□ -0.49
CACNA1C-228ENST00000492150 KLHL11Q9NVR0 708 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 PCDHB11Q9Y5F2 797 aa12□□□□□ -0.49
CACNA1C-228ENST00000492150 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-228ENST00000492150 EME2A4GXA9 379 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-228ENST00000492150 NEMP2A6NFY4 417 aa11.99□□□□□ -0.49
CACNA1C-228ENST00000492150 HNRNPRO43390 633 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-228ENST00000492150 ATP9BO43861 1147 aa11.99□□□□□ -0.49
CACNA1C-228ENST00000492150 RNGTTO60942 597 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-228ENST00000492150 PIAS2O75928 621 aa11.99□□□□□ -0.49
CACNA1C-228ENST00000492150 IGLV3-25P01717 112 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms