RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 FFAR3O14843 346 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 GPR42O15529 346 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 HOXA2O43364 376 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 EPN2O95208 641 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 NTRK1P04629 796 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 SNRPB2P08579 225 aaKnown RBP17.83■□□□□ 0.44
NPHP4-209ENST00000489180 PSMA3P25788 255 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 EPHA3P29320 983 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 CRATP43155 626 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 IDH2P48735 452 aaKnown RBP17.83■□□□□ 0.44
NPHP4-209ENST00000489180 WSCD1Q658N2 575 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 C19orf60Q96EN9 201 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 RNF157Q96PX1 679 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 CCDC3Q9BQI4 270 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 TRIM8Q9BZR9 551 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 ADARB2Q9NS39 739 aaKnown RBP17.83■□□□□ 0.44
NPHP4-209ENST00000489180 EFCAB10A6NFE3 127 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ITGAVP06756 1048 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 NUDT17P0C025 328 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ETS2P15036 469 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ST13P50502 369 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 GTF2BQ00403 316 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 DCTN2Q13561 401 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 SQLEQ14534 574 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 MAML3Q96JK9 1138 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ASB2Q96Q27 587 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ELOVL4Q9GZR5 314 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 POLR1EQ9GZS1 481 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 NFASCO94856 1347 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 hCG_1818297A0A087WSY0 165 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ANXA6P08133 673 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ADORA2AP29274 412 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 BCL2L1Q07817 233 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 AMIGO2Q86SJ2 522 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 C10orf107Q8IVU9 208 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ZNF624Q9P2J8 865 aaPredicted RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 SLC17A7Q9P2U7 560 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 BAZ2BQ9UIF8 2168 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 MEIS2O14770 477 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ABHD2P08910 425 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 GOT1P17174 413 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 PTPN1P18031 435 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 PAICSP22234 425 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 POLD2P49005 469 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 AMPD2Q01433 879 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 TEKT5Q96M29 485 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 CDK5RAP1Q96SZ6 601 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 CENPXA8MT69 81 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 NDUFB5O43674 189 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 NOS2P35228 1153 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 IRF2BP2Q7Z5L9 587 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 TMEM161BQ8NDZ6 487 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 COPS5Q92905 334 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 RCN3Q96D15 328 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 BBS4Q96RK4 519 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 LGMNQ99538 433 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 STARD7Q9NQZ5 370 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 EHD3Q9NZN3 535 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 A8MUI8 341 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 SLURP2P0DP57 97 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 C4BPBP20851 252 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 HPCAL1P37235 193 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ZCCHC8Q6NZY4 707 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 RBM44Q6ZP01 1051 aaKnown RBP17.82■□□□□ 0.44
NPHP4-209ENST00000489180 VGLL2Q8N8G2 317 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 SENP8Q96LD8 212 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 PLEKHG4BQ96PX9 1271 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 IKZF4Q9H2S9 585 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 ERVK-5Q9HDB9 667 aa17.82■□□□□ 0.44
NPHP4-209ENST00000489180 SMIM31A0A1B0GVY4 71 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 NKRFO15226 690 aaKnown RBP eCLIP17.81■□□□□ 0.44
NPHP4-209ENST00000489180 IL12RB1P42701 662 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ZNF438Q7Z4V0 828 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 FAM45AQ8TCE6 357 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 GAD1Q99259 594 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 SLC4A5Q9BY07 1137 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 PHACTR1Q9C0D0 580 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 DIABLOQ9NR28 239 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 SPATA31A6Q5VVP1 1343 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 C15orf38-AP3S2A0A0A6YYH1 394 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 WNT10BO00744 389 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 SNPHO15079 494 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 HNRNPLP14866 589 aaKnown RBP eCLIP17.81■□□□□ 0.44
NPHP4-209ENST00000489180 UBA1P22314 1058 aaKnown RBP17.81■□□□□ 0.44
NPHP4-209ENST00000489180 TGM3Q08188 693 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ARPINQ7Z6K5 226 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 FAM83AQ86UY5 434 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ADHFE1Q8IWW8 467 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 PROX1Q92786 737 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 MTF2Q9Y483 593 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-209ENST00000489180 C2orf71A6NGG8 1288 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 TNNI3P19429 210 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 PERM1Q5SV97 790 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ATAD3BQ5T9A4 648 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ULK2Q8IYT8 1036 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 OR5B17Q8NGF7 314 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 CENPIQ92674 756 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-209ENST00000489180 FAM126AQ9BYI3 521 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms