RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TBC1D3KA0A087X1G2 549 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3FA6NER0 549 aaPredicted RBP25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3LB9A6J9 549 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 GOLGA6L19H0YKK7 550 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 SH3BP5O60239 455 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 CER1O95813 267 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3HP0C7X1 549 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 RACK1P63244 317 aaKnown RBP25.51■■□□□ 1.67
HMGN1-217ENST00000489072 FAM193AP78312 1265 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 SLC20A2Q08357 652 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 HGSNATQ68CP4 663 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3GQ6DHY5 549 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3CQ6IPX1 549 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 DPY19L3Q6ZPD9 716 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TBC1D3Q8IZP1 549 aaPredicted RBP25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TMIEQ8NEW7 156 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 ARRDC3Q96B67 414 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 TRIM7Q9C029 511 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 CEP44Q9C0F1 390 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 MAGEH1Q9H213 219 aa25.51■■□□□ 1.67
HMGN1-217ENST00000489072 NOL6Q9H6R4 1146 aaKnown RBP25.51■■□□□ 1.67
HMGN1-217ENST00000489072 FCF1Q9Y324 198 aaKnown RBP25.51■■□□□ 1.67
HMGN1-217ENST00000489072 MAP1BP46821 2468 aaKnown RBP25.51■■□□□ 1.67
HMGN1-217ENST00000489072 SPAARA0A1B0GVQ0 90 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 A0A1W2PQJ5 194 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 WNT9AO14904 365 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 LATO43561 262 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 WNT1P04628 370 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 ETFBP38117 255 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 TAS2R38P59533 333 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 PIP5KL1Q5T9C9 394 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 ARFGAP1Q8N6T3 406 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 KDM4CQ9H3R0 1056 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 WASF2Q9Y6W5 498 aa25.5■■□□□ 1.67
HMGN1-217ENST00000489072 TMEM191CA6NGB0 347 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 KPNA3O00505 521 aaPredicted RBP25.49■■□□□ 1.67
HMGN1-217ENST00000489072 CREB3O43889 395 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 RAMP2O60895 175 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 ZNF883P0CG24 379 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 PSMA2P25787 234 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 EPHB2P29323 1055 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 CTSKP43235 329 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 AIF1P55008 147 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 ARSIQ5FYB1 569 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 NAXDQ8IW45 347 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 PCDH20Q8N6Y1 951 aaKnown RBP25.49■■□□□ 1.67
HMGN1-217ENST00000489072 RTL3Q8N8U3 475 aaKnown RBP25.49■■□□□ 1.67
HMGN1-217ENST00000489072 GRIN3AQ8TCU5 1115 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 CNTNAP3BQ96NU0 1288 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 CNTNAP3Q9BZ76 1288 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 TM7SF3Q9NS93 570 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 GPATCH2LQ9NWQ4 482 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 IFNKQ9P0W0 207 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 ARHGAP20Q9P2F6 1191 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 CNOT8Q9UFF9 292 aaKnown RBP25.49■■□□□ 1.67
HMGN1-217ENST00000489072 IL36AQ9UHA7 158 aa25.49■■□□□ 1.67
HMGN1-217ENST00000489072 KCNK3O14649 394 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 VILLO15195 856 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 PRNPP04156 253 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 RECQLP46063 649 aaPredicted RBP25.48■■□□□ 1.67
HMGN1-217ENST00000489072 POLD3Q15054 466 aaPredicted RBP25.48■■□□□ 1.67
HMGN1-217ENST00000489072 LEKR1Q6ZMV7 388 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 ADAT2Q7Z6V5 191 aaKnown RBP25.48■■□□□ 1.67
HMGN1-217ENST00000489072 ZNF653Q96CK0 615 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 PEBP4Q96S96 227 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 EPAS1Q99814 870 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 ISCUQ9H1K1 167 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 ANGPTL2Q9UKU9 493 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 FRYQ5TBA9 3013 aa25.48■■□□□ 1.67
HMGN1-217ENST00000489072 CXorf51AA0A1B0GTR3 108 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 A0A1W2PR77 199 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 LEFTY1O75610 366 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 MAT2AP31153 395 aaKnown RBP25.47■■□□□ 1.67
HMGN1-217ENST00000489072 DNA2P51530 1060 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 SIM1P81133 766 aaPredicted RBP25.47■■□□□ 1.67
HMGN1-217ENST00000489072 SHC2P98077 582 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 SKOR2Q2VWA4 1001 aaPredicted RBP25.47■■□□□ 1.67
HMGN1-217ENST00000489072 TDRD12Q587J7 1177 aaKnown RBP25.47■■□□□ 1.67
HMGN1-217ENST00000489072 CARD16Q5EG05 197 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 TRIM69Q86WT6 500 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 CPLX3Q8WVH0 158 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 SYN2Q92777 582 aaPredicted RBP25.47■■□□□ 1.67
HMGN1-217ENST00000489072 SERAC1Q96JX3 654 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 TM6SF2Q9BZW4 377 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 KLC2Q9H0B6 622 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 AASDHPPTQ9NRN7 309 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 TPX2Q9ULW0 747 aaKnown RBP25.47■■□□□ 1.67
HMGN1-217ENST00000489072 CAPN11Q9UMQ6 739 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 WASF3Q9UPY6 502 aa25.47■■□□□ 1.67
HMGN1-217ENST00000489072 AKAP13Q12802 2813 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 WASH4PA8MWX3 477 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 H0Y8X5 98 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 TOP3BO95985 862 aaKnown RBP25.46■■□□□ 1.67
HMGN1-217ENST00000489072 DESP17661 470 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 CCNHP51946 323 aaPredicted RBP25.46■■□□□ 1.67
HMGN1-217ENST00000489072 ZBED6P86452 979 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 FOXC1Q12948 553 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 CA9Q16790 459 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 ZNF423Q2M1K9 1284 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 CYP4V2Q6ZWL3 525 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms