RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 CNTFP26441 200 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 SEC24CP53992 1094 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 ARMC3Q5W041 872 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 TRMT10BQ6PF06 316 aaKnown RBP20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 RTL10Q7L3V2 364 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 TMEM135Q86UB9 458 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 CIR1Q86X95 450 aaPredicted RBP20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 CCDC117Q8IWD4 279 aaPredicted RBP20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 ANKRD42Q8N9B4 389 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 SPATA22Q8NHS9 363 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 MRPS31Q92665 395 aaKnown RBP20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 MYEOVQ96EZ4 313 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 ZNF419Q96HQ0 510 aaPredicted RBP20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 CCT8L2Q96SF2 557 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 VPS45Q9NRW7 570 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 RPS6KL1Q9Y6S9 549 aa20.5■□□□□ 0.87
ATP1A1-208ENST00000488733 LAMA3Q16787 3333 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 ANAPC1Q9H1A4 1944 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 PRAMEF11O60813 436 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 FAM155BO75949 473 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 KRT4P19013 534 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 HDCP19113 662 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 MGAT5Q09328 741 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 MPP2Q14168 576 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 MARK2Q7KZI7 788 aaKnown RBP20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 CFAP52Q8N1V2 620 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 PABPC5Q96DU9 382 aaKnown RBP20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 CHMP6Q96FZ7 201 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 TRPC7Q9HCX4 862 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 SMYD2Q9NRG4 433 aa20.49■□□□□ 0.87
ATP1A1-208ENST00000488733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 MT-CYBP00156 380 aaPredicted RBP20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 IRF1P10914 325 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 SMAD3P84022 425 aaKnown RBP20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 GNA12Q03113 381 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 SLC10A7Q0GE19 358 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 ZNF177Q13360 481 aaPredicted RBP20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 OLIG2Q13516 323 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 TMCO4Q5TGY1 634 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 SETD3Q86TU7 594 aaPredicted RBP20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 C4orf33Q8N1A6 199 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 IPMKQ8NFU5 416 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 IMP4Q96G21 291 aaKnown RBP20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 TRIM56Q9BRZ2 755 aaKnown RBP20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 NT5MQ9NPB1 228 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 FAM169AQ9Y6X4 670 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 MYO7AQ13402 2215 aa20.48■□□□□ 0.87
ATP1A1-208ENST00000488733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 A0A1B0GVM2 712 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ILVBLA1L0T0 632 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 TCAF2A6NFQ2 919 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 TYROBPO43914 113 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 CLASP2O75122 1294 aaKnown RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ZWINTO95229 277 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 C1RP00736 705 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 PFKLP17858 780 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 CA4P22748 312 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 GABRR2P28476 465 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 BMP8BP34820 402 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ADRA1AP35348 466 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 NIPAL4Q0D2K0 466 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 LBRQ14739 615 aaKnown RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■■■□□ 19.1
ATP1A1-208ENST00000488733 MGARPQ8TDB4 240 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ZFRQ96KR1 1074 aaKnown RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 FSD1LQ9BXM9 530 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 KIF9Q9HAQ2 790 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 SLC28A3Q9HAS3 691 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 SOX13Q9UN79 622 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 SPAG7O75391 227 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 CDC25CP30307 473 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ACVRL1P37023 503 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ETFBP38117 255 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 RPS24P62847 133 aaKnown RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 IL9RQ01113 521 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 DNAJC3Q13217 504 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ANKRD20A4Q4UJ75 823 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 PPM1LQ5SGD2 360 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 CERCAMQ5T4B2 595 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 POTEHQ6S545 545 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 TDHQ8IZJ6 230 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 BBS5Q8N3I7 341 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ARL14EPQ8N8R7 260 aaPredicted RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 DENND1AQ8TEH3 1009 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 PTCD2Q8WV60 388 aaKnown RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 CKAP2Q8WWK9 683 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 CERS2Q96G23 380 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 PRICKLE1Q96MT3 831 aaPredicted RBP20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 GCNAQ96QF7 691 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 APOL2Q9BQE5 337 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 FICDQ9BVA6 458 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 LRRC3Q9BY71 257 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 MAN1C1Q9NR34 630 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 SMPD4Q9NXE4 827 aa20.47■□□□□ 0.87
ATP1A1-208ENST00000488733 ATP9BO43861 1147 aa20.46■□□□□ 0.87
ATP1A1-208ENST00000488733 ITKQ08881 620 aa20.46■□□□□ 0.87
ATP1A1-208ENST00000488733 LRRC14Q15048 493 aa20.46■□□□□ 0.87
ATP1A1-208ENST00000488733 PCID2Q5JVF3 399 aa20.46■□□□□ 0.87
ATP1A1-208ENST00000488733 TXNDC8Q6A555 127 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms