RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 FAM46CQ5VWP2 391 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 KIAA0895LQ68EN5 471 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 TXNRD3NBQ6F5E7 133 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 DGLUCYQ7Z3D6 616 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 GAS2L3Q86XJ1 694 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 PLPP6Q8IY26 295 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 PCDH20Q8N6Y1 951 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 TMIEQ8NEW7 156 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 OR2T34Q8NGX1 318 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 ISG20Q96AZ6 181 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 HMCESQ96FZ2 354 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 PACSIN1Q9BY11 444 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 LRRC19Q9H756 370 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 EBF2Q9HAK2 575 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 SUSD2Q9UGT4 822 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 FCF1Q9Y324 198 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 A0A1B0GTW7 788 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 FAM47DPA6NHR8 397 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 RASA4BC9J798 803 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 EEF2KO00418 725 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 ARHGAP33O14559 1287 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 BCAT2O15382 392 aaPredicted RBP16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 RASA4O43374 803 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 GNSP15586 552 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 HCAR3P49019 387 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 BNC1Q01954 994 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 CNTN1Q12860 1018 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 SERINC3Q13530 473 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 POM121L1PQ3SYA9 428 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 BOLA3Q53S33 107 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 AGBL4Q5VU57 503 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 RFX8Q6ZV50 586 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 ERMP1Q7Z2K6 904 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 ZCCHC9Q8N567 271 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 OR14C36Q8NHC7 312 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 TRIM5Q9C035 493 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 MIR1-1HGQ9H1L0 117 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 OSGEPQ9NPF4 335 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 TMEM9BQ9NQ34 198 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 IP6K2Q9UHH9 426 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 ANAPC7Q9UJX3 599 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 WASF2Q9Y6W5 498 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 NUP205Q92621 2012 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 DOCK4Q8N1I0 1966 aa16.26■□□□□ 0.19
CTDSP1-209ENST00000488627 RALGAPA1Q6GYQ0 2036 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 C1QTNF3-AMACRE9PGA6 284 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 SLC7A4O43246 635 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 PLRG1O43660 514 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 FSBPO95073 299 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 ERCC2P18074 760 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 CD27P26842 260 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 CCR5P51681 352 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 TAS2R38P59533 333 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 SLC25A11Q02978 314 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 DPYSQ14117 519 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 DPYSL2Q16555 572 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 PARP15Q460N3 678 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 CARD16Q5EG05 197 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 ARSIQ5FYB1 569 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 KCNT1Q5JUK3 1230 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 PIP5KL1Q5T9C9 394 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 AFMIDQ63HM1 303 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 ARRDC3Q96B67 414 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 CCDC114Q96M63 670 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 KDM4CQ9H3R0 1056 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 ZNHIT6Q9NWK9 470 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
CTDSP1-209ENST00000488627 TNRC6BQ9UPQ9 1833 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 A0A1W2PPC4 97 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 ZSCAN5CA6NGD5 496 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 AKR1B15C9JRZ8 316 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 MYO1FO00160 1098 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 LATO43561 262 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 BUB1O43683 1085 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 LEFTY1O75610 366 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 PRNPP04156 253 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 TPM1P09493 284 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 RARAP10276 462 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 CCNHP51946 323 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 ZNF135P52742 658 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 NDST2P52849 883 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 GEMIN4P57678 1058 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 TSR1Q2NL82 804 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 SMTNL2Q2TAL5 461 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 PPP6R3Q5H9R7 873 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 CPNE8Q86YQ8 564 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 ARHGAP12Q8IWW6 846 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 TC2NQ8N9U0 490 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 OR2I1PQ8NGU4 316 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 ZNF564Q8TBZ8 553 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 SNX19Q92543 992 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 HEPHQ9BQS7 1158 aa16.24■□□□□ 0.19
CTDSP1-209ENST00000488627 TM6SF2Q9BZW4 377 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms