RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 UBL4BQ8N7F7 174 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 OR6K2Q8NGY2 324 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 OR2T3Q8NH03 318 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 GRIN3AQ8TCU5 1115 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 PTPRN2Q92932 1015 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 HAUS1Q96CS2 278 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 HES6Q96HZ4 224 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 EXOC2Q96KP1 924 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 MRGPRX1Q96LB2 322 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 HEMGNQ9BXL5 484 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 FAM86C1Q9NVL1 165 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 DTLQ9NZJ0 730 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 UBA2Q9UBT2 640 aaPredicted RBP11.26□□□□□ -0.61
UBE4B-210ENST00000488228 IPO11Q9UI26 975 aaKnown RBP11.26□□□□□ -0.61
UBE4B-210ENST00000488228 HEY1Q9Y5J3 304 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 R4GN57 208 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 LRRK1Q38SD2 2015 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 DOCK9Q9BZ29 2069 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 MYO15AQ9UKN7 3530 aa11.26□□□□□ -0.61
UBE4B-210ENST00000488228 DMDP11532 3685 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 PLXNA2O75051 1894 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 ZSCAN5CA6NGD5 496 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 AXIN1O15169 862 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 CST8O60676 142 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 PYGMP11217 842 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 GARSP41250 739 aaKnown RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 METAP1P53582 386 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 GEMIN4P57678 1058 aaKnown RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 IL10RBQ08334 325 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 ELAVL3Q14576 367 aaKnown RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 PPP2R5EQ16537 467 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 ZNF528Q3MIS6 628 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 POM121L1PQ3SYA9 428 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 TFDP3Q5H9I0 405 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 B4GALNT4Q76KP1 1039 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 TMPRSS6Q8IU80 811 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 MMAAQ8IVH4 418 aaKnown RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 RCOR2Q8IZ40 523 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 CAMKK1Q8N5S9 505 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 FAM160A2Q8N612 972 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 CHST14Q8NCH0 376 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 TRIM58Q8NG06 486 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 OR2A12Q8NGT7 310 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 NELL1Q92832 810 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 ZNF419Q96HQ0 510 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 MAK16Q9BXY0 300 aaKnown RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 CEP44Q9C0F1 390 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 RSPH9Q9H1X1 276 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 PRDM16Q9HAZ2 1276 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 SAE1Q9UBE0 346 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-210ENST00000488228 LHX3Q9UBR4 397 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 SUN2Q9UH99 717 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 INVSQ9Y283 1065 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
UBE4B-210ENST00000488228 WDR87Q6ZQQ6 2873 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 GPR179Q6PRD1 2367 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 RNF103O00237 685 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 MAFKO60675 156 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 CTSLP07711 333 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 HOXA6P31267 233 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 GKP32189 559 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 RGRP47804 291 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 CCNHP51946 323 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-210ENST00000488228 RHOAP61586 193 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 RPS14P62263 151 aaKnown RBP11.24□□□□□ -0.61
UBE4B-210ENST00000488228 SLC20A2Q08357 652 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 SLC10A7Q0GE19 358 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 TFDP2Q14188 446 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 FAM182AQ5T1J6 154 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 MEI1Q5TIA1 1274 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 ZNF776Q68DI1 518 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-210ENST00000488228 DPY19L3Q6ZPD9 716 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 BBS12Q6ZW61 710 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 WDR5BQ86VZ2 330 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 LONP2Q86WA8 852 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 RYBPQ8N488 228 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-210ENST00000488228 PCDH20Q8N6Y1 951 aaKnown RBP11.24□□□□□ -0.61
UBE4B-210ENST00000488228 FRMD1Q8N878 549 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 RLN3Q8WXF3 142 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 OR8D1Q8WZ84 308 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 OLFM3Q96PB7 478 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 FAM129BQ96TA1 746 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 LGMNQ99538 433 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 PRRX2Q99811 253 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 FAM118BQ9BPY3 351 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 CINPQ9BW66 212 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-210ENST00000488228 OSBPL8Q9BZF1 889 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 ZDHHC6Q9H6R6 413 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 FBRSQ9HAH7 460 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 ZSCAN32Q9NX65 697 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 EBF1Q9UH73 591 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 CYP8B1Q9UNU6 501 aa11.24□□□□□ -0.61
UBE4B-210ENST00000488228 USP34Q70CQ2 3546 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 CXorf51AA0A1B0GTR3 108 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 TARSL2A2RTX5 802 aaKnown RBP11.23□□□□□ -0.61
UBE4B-210ENST00000488228 PLK4O00444 970 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 ENC1O14682 589 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 MUSKO15146 869 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms