RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 BBS12Q6ZW61 710 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 SERPINA11Q86U17 422 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 LRRTM4Q86VH4 590 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 SMAP1Q8IYB5 467 aaPredicted RBP4.76□□□□□ -1.65
PTEN-204ENST00000487939 GHDCQ8N2G8 530 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 HORMAD2Q8N7B1 307 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 SETD9Q8NE22 299 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 C7orf57Q8NEG2 295 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 WDR77Q9BQA1 342 aaPredicted RBP4.76□□□□□ -1.65
PTEN-204ENST00000487939 CATSPERBQ9H7T0 1116 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 TLR8Q9NR97 1041 aaKnown RBP4.76□□□□□ -1.65
PTEN-204ENST00000487939 ALKBH4Q9NXW9 302 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 SEL1LQ9UBV2 794 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 CNPY2Q9Y2B0 182 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 CLDN16Q9Y5I7 305 aa4.76□□□□□ -1.65
PTEN-204ENST00000487939 ARID4BQ4LE39 1312 aaPredicted RBP4.75□□□□□ -1.65
PTEN-204ENST00000487939 CYP1A2P05177 515 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 SNHG28P0DPA3 235 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 ENO3P13929 434 aaPredicted RBP4.75□□□□□ -1.65
PTEN-204ENST00000487939 HOXB2P14652 356 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 ARSBP15848 533 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 CHRNB2P17787 502 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 RFC1P35251 1148 aaPredicted RBP4.75□□□□□ -1.65
PTEN-204ENST00000487939 AVPR1AP37288 418 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 DPP6P42658 865 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 GPR12P47775 334 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 KRTAP10-11P60412 298 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 PKP1Q13835 747 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 GPR18Q14330 331 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 WDR45BQ5MNZ6 344 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 SH2D4BQ5SQS7 431 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 ATG16L1Q676U5 607 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 C9orf47Q6ZRZ4 202 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 EXOC8Q8IYI6 725 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 NOC3LQ8WTT2 800 aaKnown RBP4.75□□□□□ -1.65
PTEN-204ENST00000487939 HERVK_113Q902F9 699 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 STAMQ92783 540 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 UBXN10Q96LJ8 280 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 SF3B5Q9BWJ5 86 aaKnown RBP4.75□□□□□ -1.65
PTEN-204ENST00000487939 TAOK3Q9H2K8 898 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 EBF3Q9H4W6 596 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 KLHL31Q9H511 634 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 MYH16Q9H6N6 1097 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 ENTPD7Q9NQZ7 604 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 HIF1ANQ9NWT6 349 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 NCKIPSDQ9NZQ3 722 aa4.75□□□□□ -1.65
PTEN-204ENST00000487939 A0A096LPK6 155 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 SH2D7A6NKC9 451 aaPredicted RBP4.74□□□□□ -1.65
PTEN-204ENST00000487939 HSPB6O14558 160 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 NTN1O95631 604 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 SERPINC1P01008 464 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 CHRM4P08173 479 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 GPD2P43304 727 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 RFX2P48378 723 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 TMPRSS3P57727 454 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 SELENOVP59797 346 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 ZP1P60852 638 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 CHRNDQ07001 517 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 TMEM95Q3KNT9 176 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 OTUD1Q5VV17 481 aaPredicted RBP4.74□□□□□ -1.65
PTEN-204ENST00000487939 DCAF12L2Q5VW00 463 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 TBC1D9BQ66K14 1250 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 ZNF549Q6P9A3 640 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 DNAAF1Q8NEP3 725 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 ENGASEQ8NFI3 743 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 HSPH1Q92598 858 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 CNOT9Q92600 299 aaKnown RBP4.74□□□□□ -1.65
PTEN-204ENST00000487939 USP13Q92995 863 aaPredicted RBP4.74□□□□□ -1.65
PTEN-204ENST00000487939 ATP8A2Q9NTI2 1148 aa4.74□□□□□ -1.65
PTEN-204ENST00000487939 PLEKHB1Q9UF11 243 aaPredicted RBP4.74□□□□□ -1.65
PTEN-204ENST00000487939 TARSL2A2RTX5 802 aaKnown RBP4.73□□□□□ -1.65
PTEN-204ENST00000487939 PLEKHD1A6NEE1 506 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 FAM157AC9JC47 383 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 MS4A18H0YCH9 400 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 EYA2O00167 538 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 TNFRSF13BO14836 293 aaPredicted RBP4.73□□□□□ -1.65
PTEN-204ENST00000487939 GUCY1B2O75343 617 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 CKMT1AP12532 417 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 CDH12P55289 794 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 FOXG1P55316 489 aaPredicted RBP4.73□□□□□ -1.65
PTEN-204ENST00000487939 LINC00205P59089 165 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 ROR2Q01974 943 aaKnown RBP4.73□□□□□ -1.65
PTEN-204ENST00000487939 TLE2Q04725 743 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTEN-204ENST00000487939 NAA25Q14CX7 972 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 RPE65Q16518 533 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 SLC18A3Q16572 532 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 DUSP6Q16828 381 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 NAA35Q5VZE5 725 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 TMEM71Q6P5X7 295 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 Q6ZTK2 550 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 TRIM74Q86UV6 250 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 TRIM73Q86UV7 250 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 GLCCI1Q86VQ1 547 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 PALB2Q86YC2 1186 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 RFWD2Q8NHY2 731 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 CEP76Q8TAP6 659 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 TMEM163Q8TC26 289 aa4.73□□□□□ -1.65
PTEN-204ENST00000487939 SLC35F5Q8WV83 523 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms