RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 VPS36Q86VN1 386 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 PCDH20Q8N6Y1 951 aaKnown RBP20.86■□□□□ 0.93
HDAC4-209ENST00000487617 RTL3Q8N8U3 475 aaKnown RBP20.86■□□□□ 0.93
HDAC4-209ENST00000487617 FAM131CQ96AQ9 280 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 TRIM7Q9C029 511 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 GAREM1Q9H706 876 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 GPATCH2LQ9NWQ4 482 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 MYO1AQ9UBC5 1043 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 FCF1Q9Y324 198 aaKnown RBP20.86■□□□□ 0.93
HDAC4-209ENST00000487617 LUC7L2Q9Y383 392 aaKnown RBP20.86■□□□□ 0.93
HDAC4-209ENST00000487617 ACTL7AQ9Y615 435 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 SCINQ9Y6U3 715 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 LAMA1P25391 3075 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 ADAMTS9Q9P2N4 1935 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 RNF8O76064 485 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 SERPING1P05155 500 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 CD59P13987 128 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 GEMIN4P57678 1058 aaKnown RBP20.85■□□□□ 0.93
HDAC4-209ENST00000487617 RACK1P63244 317 aaKnown RBP20.85■□□□□ 0.93
HDAC4-209ENST00000487617 ZNF252P-AS1Q0IIN9 211 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 SLC14A1Q13336 389 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 KIF19Q2TAC6 998 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 HLA-BQ31612 363 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 ARSIQ5FYB1 569 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 AGBL4Q5VU57 503 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 DPY19L3Q6ZPD9 716 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 PIP4P1Q86T03 277 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 ZNF354CQ86Y25 554 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 TMIEQ8NEW7 156 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 GRIN3AQ8TCU5 1115 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 SLC6A18Q96N87 628 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 XPO4Q9C0E2 1151 aaKnown RBP20.85■□□□□ 0.93
HDAC4-209ENST00000487617 ISCUQ9H1K1 167 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 KDM4CQ9H3R0 1056 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 TSPY26PQ9H489 355 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 CATSPERBQ9H7T0 1116 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 EBF2Q9HAK2 575 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 IL21RQ9HBE5 538 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 MRPL47Q9HD33 250 aaKnown RBP20.85■□□□□ 0.93
HDAC4-209ENST00000487617 DYRK4Q9NR20 520 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 IL36AQ9UHA7 158 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 TPX2Q9ULW0 747 aaKnown RBP20.85■□□□□ 0.93
HDAC4-209ENST00000487617 ANKRD6Q9Y2G4 727 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 DOCK4Q8N1I0 1966 aa20.85■□□□□ 0.93
HDAC4-209ENST00000487617 CXorf51AA0A1B0GTR3 108 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 PLRG1O43660 514 aaKnown RBP20.84■□□□□ 0.93
HDAC4-209ENST00000487617 ZNF821O75541 412 aaPredicted RBP20.84■□□□□ 0.93
HDAC4-209ENST00000487617 CD160O95971 181 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 GYPCP04921 128 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 PPP2CBP62714 309 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 PPP2CAP67775 309 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 CARD16Q5EG05 197 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 ARFGAP1Q8N6T3 406 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 FNIP1Q8TF40 1166 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 AASDHPPTQ9NRN7 309 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 PCSK1NQ9UHG2 260 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 AP4E1Q9UPM8 1137 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 SNX11Q9Y5W9 270 aa20.84■□□□□ 0.93
HDAC4-209ENST00000487617 ASCC3Q8N3C0 2202 aaKnown RBP20.84■□□□□ 0.93
HDAC4-209ENST00000487617 CACNA1EQ15878 2313 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 C10orf142B7Z368 130 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 KDELR3O43731 214 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 C21orf59P57076 290 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 TPI1P60174 286 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 CCDC15Q0P6D6 951 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 NFKBIBQ15653 356 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 PIP5KL1Q5T9C9 394 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 LEKR1Q6ZMV7 388 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 ISG20Q96AZ6 181 aaKnown RBP20.83■□□□□ 0.93
HDAC4-209ENST00000487617 ARRDC3Q96B67 414 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 HEPHQ9BQS7 1158 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 TM6SF2Q9BZW4 377 aa20.83■□□□□ 0.93
HDAC4-209ENST00000487617 DHX35Q9H5Z1 703 aaKnown RBP20.83■□□□□ 0.93
HDAC4-209ENST00000487617 NOL6Q9H6R4 1146 aaKnown RBP20.83■□□□□ 0.93
HDAC4-209ENST00000487617 FNDC3AQ9Y2H6 1198 aaKnown RBP20.83■□□□□ 0.93
HDAC4-209ENST00000487617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.83■□□□□ 0.93
HDAC4-209ENST00000487617 NYNRINQ9P2P1 1898 aaKnown RBP20.83■□□□□ 0.92
HDAC4-209ENST00000487617 WASH4PA8MWX3 477 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 RNF103O00237 685 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 FGF10O15520 208 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-209ENST00000487617 CBFA2T2O43439 604 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 BUB1O43683 1085 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 SH3BP5O60239 455 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 PRPSAP2O60256 369 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 LEFTY1O75610 366 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 MIPP30301 263 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 MAT2AP31153 395 aaKnown RBP20.82■□□□□ 0.92
HDAC4-209ENST00000487617 CASP14P31944 242 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 HTR7P34969 479 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 CCNHP51946 323 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-209ENST00000487617 YBEYP58557 167 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-209ENST00000487617 CA9Q16790 459 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 ERMARDQ5T6L9 678 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 PRPF39Q86UA1 669 aaKnown RBP20.82■□□□□ 0.92
HDAC4-209ENST00000487617 RYBPQ8N488 228 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-209ENST00000487617 SKA1Q96BD8 255 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 PPP1R16AQ96I34 528 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 SERAC1Q96JX3 654 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 PEBP4Q96S96 227 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 SNRNP25Q9BV90 132 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms