RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ERVW-1Q9UQF0 538 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF148Q9UQR1 794 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 TBC1D3BA6NDS4 549 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 ANTXRLA6NF34 631 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 K7ERQ8 282 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 SGK1O00141 431 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 MAN2B1O00754 1011 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 RAD51CO43502 376 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 SMAD6O43541 496 aaKnown RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 ATP9BO43861 1147 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 OPHN1O60890 802 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 GCATO75600 419 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 ECEL1O95672 775 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 EGFP01133 1207 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 SRPRAP08240 638 aaKnown RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 HNRNPLP14866 589 aaKnown RBP eCLIP9.74□□□□□ -0.854e-9■□□□□ 10.8
MCF2L-227ENST00000486806 DRD1P21728 446 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 CD68P34810 354 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 TNFRSF4P43489 277 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 MMP13P45452 471 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 RENBPP51606 427 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 STARD6P59095 220 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 DR1Q01658 176 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 GRSF1Q12849 480 aaKnown RBP eCLIP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 ENPP2Q13822 863 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 PTK6Q13882 451 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 CYTH1Q15438 398 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 KCTD19Q17RG1 926 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 TEX44Q53QW1 395 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 FAM182AQ5T1J6 154 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 MARC1Q5VT66 337 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 EGFLAMQ63HQ2 1017 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 C22orf39Q6P5X5 142 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 PRUNE1Q86TP1 453 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 JAMLQ86YT9 394 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 PGBD5Q8N414 524 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 FRS2Q8WU20 508 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 CYB5D2Q8WUJ1 264 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 NSMCE1Q8WV22 266 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 FAM3CQ92520 227 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 VOPP1Q96AW1 172 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 ISG20Q96AZ6 181 aaKnown RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 RPL10LQ96L21 214 aaKnown RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 TEKT5Q96M29 485 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 GORASP1Q9BQQ3 440 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 CINPQ9BW66 212 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 CEP44Q9C0F1 390 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 TMEM245Q9H330 911 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 PCDH9Q9HC56 1237 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 SEPT10Q9P0V9 454 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 THAP10Q9P2Z0 257 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 LHX3Q9UBR4 397 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 SEPT3Q9UH03 358 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 FEZ2Q9UHY8 353 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 SLC25A13Q9UJS0 675 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 TRHDEQ9UKU6 1024 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 CA14Q9ULX7 337 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 ATP8A1Q9Y2Q0 1164 aa9.74□□□□□ -0.85
MCF2L-227ENST00000486806 FCF1Q9Y324 198 aaKnown RBP9.74□□□□□ -0.85
MCF2L-227ENST00000486806 NPC1O15118 1278 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 TTI1O43156 1089 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ZBTB24O43167 697 aaPredicted RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 STK10O94804 968 aaKnown RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 SLU7O95391 586 aaKnown RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 GAS8O95995 478 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 IFNB1P01574 187 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 JCHAINP01591 159 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ZSCAN5DPP0CG00 497 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ETS1P14921 441 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 CR2P20023 1033 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 HSPA9P38646 679 aaKnown RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 IL12RB1P42701 662 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 RGRP47804 291 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF234Q14588 700 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF235Q14590 738 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 DGKKQ5KSL6 1271 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ANKRD20A2Q5SQ80 823 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ANKRD20A1Q5TYW2 823 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ANKRD20A3Q5VUR7 823 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF852Q6ZMS4 543 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 NUDT18Q6ZVK8 323 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 SYDE1Q6ZW31 735 aaPredicted RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 KLHDC8BQ8IXV7 354 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 PCDH20Q8N6Y1 951 aaKnown RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 CCDC89Q8N998 374 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 ATP11CQ8NB49 1132 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 TSEN2Q8NCE0 465 aaKnown RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 CCDC110Q8TBZ0 833 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 USP33Q8TEY7 942 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 UCMAQ8WVF2 138 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 TADA1Q96BN2 335 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 AGAP3Q96P47 875 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 FERMT1Q9BQL6 677 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 GBA3Q9H227 469 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 NT5MQ9NPB1 228 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 RBM22Q9NW64 420 aaKnown RBP eCLIP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 PAK5Q9P286 719 aa9.73□□□□□ -0.85
MCF2L-227ENST00000486806 KLHL8Q9P2G9 620 aaPredicted RBP9.73□□□□□ -0.85
MCF2L-227ENST00000486806 SLCO3A1Q9UIG8 710 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms