RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 LRRC19Q9H756 370 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 TRPV5Q9NQA5 729 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 GTSE1Q9NYZ3 720 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 KLHL8Q9P2G9 620 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 SAE1Q9UBE0 346 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 ASIC3Q9UHC3 531 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 TRHDEQ9UKU6 1024 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 SORCS3Q9UPU3 1222 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 DRG1Q9Y295 367 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 R4GN57 208 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 GREB1Q4ZG55 1949 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 BCLAF3A2AJT9 711 aaKnown RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 FAM187AA6NFU0 413 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 SPECC1L-ADORA2AF8WAN1 911 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 I6L893 689 aaPredicted RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 NPC1O15118 1278 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 KDELR3O43731 214 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 TULP3O75386 442 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 MAP3K6O95382 1288 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 ITGAVP06756 1048 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 ASGR2P07307 311 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 SRPRAP08240 638 aaKnown RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 CCNB1P14635 433 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 PECAM1P16284 738 aaPredicted RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 DRD1P21728 446 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 CES1P23141 567 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 NFKBIAP25963 317 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 GJA4P35212 333 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 COILP38432 576 aaPredicted RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 HSPA9P38646 679 aaKnown RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 ADCY8P40145 1251 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 MMP13P45452 471 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 SGSHP51688 502 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 PRKCQQ04759 706 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 KDSRQ06136 332 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 IL10RBQ08334 325 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 PPIDQ08752 370 aaKnown RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 C2orf54Q08AI8 447 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 GALNT2Q10471 571 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 LMAN2Q12907 356 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 CALCOCO2Q13137 446 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 KLF1Q13351 362 aaPredicted RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 HNRNPDQ14103 355 aaKnown RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 LBRQ14739 615 aaKnown RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 ANGPT1Q15389 498 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 P3H1Q32P28 736 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 PLEKHG6Q3KR16 790 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 FBXO43Q4G163 708 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 FNDC3BQ53EP0 1204 aaKnown RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 INO80DQ53TQ3 878 aaPredicted RBP7.09□□□□□ -1.27
UBR4-214ENST00000486515 PITRM1Q5JRX3 1037 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 CFAP58Q5T655 872 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 MBLAC2Q68D91 279 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 NPNTQ6UXI9 565 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 ZNF852Q6ZMS4 543 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 PCGF5Q86SE9 256 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 UBALD2Q8IYN6 164 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 ZNF683Q8IZ20 524 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 FAM71DQ8N9W8 422 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 BBOF1Q8ND07 529 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 ATG4AQ8WYN0 398 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 FAM3CQ92520 227 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 UBXN4Q92575 508 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 RSPRY1Q96DX4 576 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 QKIQ96PU8 341 aaKnown RBP eCLIP7.09□□□□□ -1.27
UBR4-214ENST00000486515 FAM118BQ9BPY3 351 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 FEM1AQ9BSK4 669 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 TMEM121Q9BTD3 319 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 KLC2Q9H0B6 622 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 MFSD1Q9H3U5 465 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 PAK5Q9P286 719 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 SEPT3Q9UH03 358 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 AMACRQ9UHK6 382 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 RSPH14Q9UHP6 348 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 DNPEPQ9ULA0 475 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 SLC27A6Q9Y2P4 619 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 PIAS3Q9Y6X2 628 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 HECTD1Q9ULT8 2610 aa7.09□□□□□ -1.27
UBR4-214ENST00000486515 ZNF638Q14966 1978 aaKnown RBP7.08□□□□□ -1.28
UBR4-214ENST00000486515 A0A0D9SEW6 157 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 CXorf51AA0A1B0GTR3 108 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 EFCAB8A8MWE9 144 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 AP3B1O00203 1094 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 RNF103O00237 685 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 PSMD3O43242 534 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 BNIP3LO60238 219 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 SYNCRIPO60506 623 aaKnown RBP7.08□□□□□ -1.28
UBR4-214ENST00000486515 PRAMEF11O60813 436 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 OPHN1O60890 802 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 RNASEH1O60930 286 aaKnown RBP7.08□□□□□ -1.28
UBR4-214ENST00000486515 ANXA9O76027 345 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 KAT7O95251 611 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 IGSF6O95976 241 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 KRT14P02533 472 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
UBR4-214ENST00000486515 RBL1P28749 1068 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 CD70P32970 193 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 ACVRL1P37023 503 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 TNFRSF4P43489 277 aa7.08□□□□□ -1.28
UBR4-214ENST00000486515 MAPK8P45983 427 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms