RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 GLDCP23378 1020 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 DPP6P42658 865 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 ARSEP51690 589 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 TPI1P60174 286 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 ECT2LQ008S8 904 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 GNA12Q03113 381 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 CAMK2GQ13555 558 aaPredicted RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 DPYSQ14117 519 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 MESDQ14696 234 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 E2F5Q15329 346 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 SPA17Q15506 151 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 TRIP6Q15654 476 aaKnown RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 FNDC3BQ53EP0 1204 aaKnown RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 BOLA3Q53S33 107 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 PNPLA1Q8N8W4 532 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 TSC1Q92574 1164 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 RPL10LQ96L21 214 aaKnown RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 ACE2Q9BYF1 805 aaPredicted RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 KLC2Q9H0B6 622 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 MTG2Q9H4K7 406 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 PCDH18Q9HCL0 1135 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 POLMQ9NP87 494 aaPredicted RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 FSCN3Q9NQT6 498 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSR4-211ENST00000486204 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
SSR4-211ENST00000486204 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 VPS51Q9UID3 782 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 SLCO3A1Q9UIG8 710 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 VPS28Q9UK41 221 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 SLC6A14Q9UN76 642 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 LRRK1Q38SD2 2015 aa13.21□□□□□ -0.29
SSR4-211ENST00000486204 PLXNA2O75051 1894 aa13.21□□□□□ -0.3
SSR4-211ENST00000486204 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
SSR4-211ENST00000486204 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 GOLGA6L6A8MZA4 724 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 TK2O00142 265 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 EEF2KO00418 725 aaKnown RBP13.2□□□□□ -0.3
SSR4-211ENST00000486204 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
SSR4-211ENST00000486204 PJA2O43164 708 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 SNAP91O60641 907 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 EPHX1P07099 455 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 CD59P13987 128 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 PLA2G2AP14555 144 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 NDUFV2P19404 249 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 ACVRL1P37023 503 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 ARHGAP25P42331 645 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 PTGER3P43115 390 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 HCAR3P49019 387 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 COPAP53621 1224 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 ARF5P84085 180 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 SULT2A1Q06520 285 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 PPP6R3Q5H9R7 873 aaPredicted RBP13.2□□□□□ -0.3
SSR4-211ENST00000486204 SDE2Q6IQ49 451 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 ZNF605Q86T29 641 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 UMODL1-AS1Q8N2C9 162 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 FRS2Q8WU20 508 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 SLC39A7Q92504 469 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 HSPH1Q92598 858 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 ARHGEF2Q92974 986 aaKnown RBP13.2□□□□□ -0.3
SSR4-211ENST00000486204 PPP1R9BQ96SB3 815 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 LACRTQ9GZZ8 138 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 MKRN2Q9H000 416 aaKnown RBP13.2□□□□□ -0.3
SSR4-211ENST00000486204 MUC3BQ9H195 1237 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 SLC6A17Q9H1V8 727 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 PILRBQ9UKJ0 227 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 PLA2G4CQ9UP65 541 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 HS3ST2Q9Y278 367 aa13.2□□□□□ -0.3
SSR4-211ENST00000486204 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
SSR4-211ENST00000486204 A0A0U1RQJ8 604 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 BTNL10A8MVZ5 291 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 TTC34A8MYJ7 566 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 BUB1BO60566 1050 aaPredicted RBP13.19□□□□□ -0.3
SSR4-211ENST00000486204 C1QL1O75973 258 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 CD160O95971 181 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 CD48P09326 243 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 FTH1P19P0C7X4 201 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 SRCP12931 536 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 ERCC2P18074 760 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 IL4RP24394 825 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 VAV2P52735 878 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 ZNF135P52742 658 aaPredicted RBP13.19□□□□□ -0.3
SSR4-211ENST00000486204 CCZ1BP86790 482 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 CCZ1P86791 482 aaPredicted RBP13.19□□□□□ -0.3
SSR4-211ENST00000486204 HADHQ16836 314 aaKnown RBP13.19□□□□□ -0.3
SSR4-211ENST00000486204 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 HNRNPA1L2Q32P51 320 aaKnown RBP13.19□□□□□ -0.3
SSR4-211ENST00000486204 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 AFMIDQ63HM1 303 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 POLNQ7Z5Q5 900 aa13.19□□□□□ -0.3
SSR4-211ENST00000486204 SH2D3CQ8N5H7 860 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms