RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SLCO3A1Q9UIG8 710 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 HCN2Q9UL51 889 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 FCF1Q9Y324 198 aaKnown RBP11.61□□□□□ -0.55
NUP50-216ENST00000486184 TRIOO75962 3097 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 TARSL2A2RTX5 802 aaKnown RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 J3KR12 359 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 ATP9BO43861 1147 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 CEP104O60308 925 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 ADAM23O75077 832 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 MT-CO1P00395 513 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 ATP1A1P05023 1023 aaKnown RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 CCNCP24863 283 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 SNRPD1P62314 119 aaKnown RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 AP1B1Q10567 949 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 ENPP2Q13822 863 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 GAS6Q14393 721 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 RFTN1Q14699 578 aaPredicted RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 LBRQ14739 615 aaKnown RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 INO80DQ53TQ3 878 aaPredicted RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 TMCO4Q5TGY1 634 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 DCAF12L1Q5VU92 463 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 AADACL2Q6P093 401 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 NPNTQ6UXI9 565 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 ARHGAP36Q6ZRI8 547 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 DSG4Q86SJ6 1040 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 C1orf210Q8IVY1 113 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 TP53INP2Q8IXH6 220 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 CCDC13Q8IYE1 715 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 PCDH20Q8N6Y1 951 aaKnown RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 MAIP1Q8WWC4 291 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 OR8D1Q8WZ84 308 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 HDAC11Q96DB2 347 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 MYO19Q96H55 970 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 PBKQ96KB5 322 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 ZNF599Q96NL3 588 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 HHIPQ96QV1 700 aa11.6□□□□□ -0.55
NUP50-216ENST00000486184 NAPGQ99747 312 aaPredicted RBP11.6□□□□□ -0.55
NUP50-216ENST00000486184 H7C0C1 242 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 K7ERQ8 282 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 MCF2LO15068 1137 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 SMAD6O43541 496 aaKnown RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 MAFKO60675 156 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 SIN3BO75182 1162 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 TMCC1O94876 653 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 APBB3O95704 486 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 IGSF6O95976 241 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 PECAM1P16284 738 aaPredicted RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 CXCR5P32302 372 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 ATP5OP48047 213 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 RENBPP51606 427 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 SATB1Q01826 763 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 RAD51Q06609 339 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 PPIDQ08752 370 aaKnown RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 SLC10A2Q12908 348 aaPredicted RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 ELAVL3Q14576 367 aaKnown RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 MARC1Q5VT66 337 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 ANO7Q6IWH7 933 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 TMEM92Q6UXU6 159 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 Q6ZVU0 165 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 CDKL3Q8IVW4 592 aaPredicted RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 CAMKK1Q8N5S9 505 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 OR2T3Q8NH03 318 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 TFB1MQ8WVM0 346 aaKnown RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 HMGB4Q8WW32 186 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 ISG20Q96AZ6 181 aaKnown RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 GDAP1L1Q96MZ0 367 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 NAP1L3Q99457 506 aaPredicted RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 LRFN3Q9BTN0 628 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 TM6SF2Q9BZW4 377 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 TNKS2Q9H2K2 1166 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 PDFQ9HBH1 243 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 SEPT10Q9P0V9 454 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 SAE1Q9UBE0 346 aaPredicted RBP11.59□□□□□ -0.55
NUP50-216ENST00000486184 SEPT3Q9UH03 358 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 ACTL7AQ9Y615 435 aa11.59□□□□□ -0.55
NUP50-216ENST00000486184 EML5Q05BV3 1969 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 A0A1W2PQF6 199 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 HACD1B0YJ81 288 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 MATN3O15232 486 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ALOX15BO15296 676 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 MTSS1O43312 755 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ZNF189O75820 626 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 STK10O94804 968 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 PAPSS2O95340 614 aaPredicted RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 GSRP00390 522 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 FGGP02679 453 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 DNTTP04053 509 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 ACADMP11310 421 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 TCP1P17987 556 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 COL9A1P20849 921 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 CASQ1P31415 396 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 HSPA9P38646 679 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 MMP13P45452 471 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 NRLP54845 237 aa11.58□□□□□ -0.56
NUP50-216ENST00000486184 EIF3EP60228 445 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 OTUD4Q01804 1114 aaKnown RBP11.58□□□□□ -0.56
NUP50-216ENST00000486184 CSTF1Q05048 431 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms