RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 CEP44Q9C0F1 390 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 DUSP15Q9H1R2 295 aaPredicted RBP27.32■■□□□ 1.96
CCM2-211ENST00000478582 MTG2Q9H4K7 406 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 AMFRQ9UKV5 643 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 CKAP5Q14008 2032 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 RALGAPA1Q6GYQ0 2036 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 SDK1Q7Z5N4 2213 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 K7ERQ8 282 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 SMAD6O43541 496 aaKnown RBP27.31■■□□□ 1.96
CCM2-211ENST00000478582 SIN3BO75182 1162 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 ID4P47928 161 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 MARCKSL1P49006 195 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 PEX5P50542 639 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 INO80DQ53TQ3 878 aaPredicted RBP27.31■■□□□ 1.96
CCM2-211ENST00000478582 MFSD7Q6UXD7 560 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 PEX26Q7Z412 305 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 METTL3Q86U44 580 aaKnown RBP27.31■■□□□ 1.96
CCM2-211ENST00000478582 C11orf74Q86VG3 221 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 EXD1Q8NHP7 514 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 HMGB4Q8WW32 186 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 ISG20Q96AZ6 181 aaKnown RBP27.31■■□□□ 1.96
CCM2-211ENST00000478582 MRGPRX1Q96LB2 322 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 MKRN2Q9H000 416 aaKnown RBP27.31■■□□□ 1.96
CCM2-211ENST00000478582 PDFQ9HBH1 243 aa27.31■■□□□ 1.96
CCM2-211ENST00000478582 PRAMEF11O60813 436 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 RHOBTB1O94844 696 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 NDUFV2P19404 249 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 CDKN2BP42772 138 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 ACCSLQ4AC99 568 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 SLC9A4Q6AI14 798 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 ZNF354CQ86Y25 554 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 TMPRSS6Q8IU80 811 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 LRRC49Q8IUZ0 686 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 LZTFL1Q9NQ48 299 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 SEMA4GQ9NTN9 838 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 BCCIPQ9P287 314 aaKnown RBP eCLIP27.3■■□□□ 1.96
CCM2-211ENST00000478582 INVSQ9Y283 1065 aa27.3■■□□□ 1.96
CCM2-211ENST00000478582 MIF4GDA9UHW6 222 aaKnown RBP27.29■■□□□ 1.96
CCM2-211ENST00000478582 DFFAO00273 331 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 EPN2O95208 641 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 LMNB2Q03252 620 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 ELF2Q15723 593 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 CSRP2Q16527 193 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 C22orf39Q6P5X5 142 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 TP53INP2Q8IXH6 220 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 RBM41Q96IZ5 413 aaKnown RBP27.29■■□□□ 1.96
CCM2-211ENST00000478582 MAK16Q9BXY0 300 aaKnown RBP27.29■■□□□ 1.96
CCM2-211ENST00000478582 RSPH9Q9H1X1 276 aaPredicted RBP27.29■■□□□ 1.96
CCM2-211ENST00000478582 ARRDC1-AS1Q9H2J1 176 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 ACTL7AQ9Y615 435 aa27.29■■□□□ 1.96
CCM2-211ENST00000478582 ZNF821O75541 412 aaPredicted RBP27.28■■□□□ 1.96
CCM2-211ENST00000478582 VAV1P15498 845 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 ZFXP17010 805 aaPredicted RBP27.28■■□□□ 1.96
CCM2-211ENST00000478582 COPS2P61201 443 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 IL10RBQ08334 325 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 ELAVL3Q14576 367 aaKnown RBP27.28■■□□□ 1.96
CCM2-211ENST00000478582 SPOCD1Q6ZMY3 1216 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 PLPP6Q8IY26 295 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 PGBD3Q8N328 593 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 PCDH20Q8N6Y1 951 aaKnown RBP27.28■■□□□ 1.96
CCM2-211ENST00000478582 NETO2Q8NC67 525 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 RMDN1Q96DB5 314 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 ERLEC1Q96DZ1 483 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 FAM129BQ96TA1 746 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 IPO11Q9UI26 975 aaKnown RBP27.28■■□□□ 1.96
CCM2-211ENST00000478582 PCDHGA5Q9Y5G8 931 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 SPTBN4Q9H254 2564 aa27.28■■□□□ 1.96
CCM2-211ENST00000478582 PRR5-ARHGAP8B1AHC4 643 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 J3KR12 359 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 ALOX15BO15296 676 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 MFSD11O43934 449 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 P2RY2P41231 377 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 RWDD2BP57060 319 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 ARHGAP8P85298 464 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 ZBTB16Q05516 673 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 TFDP3Q5H9I0 405 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 Q6ZVU0 165 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 PLD5Q8N7P1 536 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.27■■□□□ 1.96
CCM2-211ENST00000478582 PRCCQ92733 491 aaPredicted RBP27.27■■□□□ 1.96
CCM2-211ENST00000478582 SIPA1Q96FS4 1042 aa27.27■■□□□ 1.96
CCM2-211ENST00000478582 UBA2Q9UBT2 640 aaPredicted RBP27.27■■□□□ 1.96
CCM2-211ENST00000478582 FCF1Q9Y324 198 aaKnown RBP27.27■■□□□ 1.96
CCM2-211ENST00000478582 ABCA7Q8IZY2 2146 aa27.26■■□□□ 1.96
CCM2-211ENST00000478582 APOL1O14791 398 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 MCF2LO15068 1137 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 ZSCAN12O43309 604 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 FOXD2O60548 495 aaPredicted RBP27.26■■□□□ 1.95
CCM2-211ENST00000478582 FTCDO95954 541 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 RPS14P62263 151 aaKnown RBP27.26■■□□□ 1.95
CCM2-211ENST00000478582 GALNT2Q10471 571 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 BYSLQ13895 437 aaKnown RBP27.26■■□□□ 1.95
CCM2-211ENST00000478582 TFDP2Q14188 446 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 PPP2R5EQ16537 467 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 ZNF776Q68DI1 518 aaPredicted RBP27.26■■□□□ 1.95
CCM2-211ENST00000478582 ARHGAP36Q6ZRI8 547 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 STK40Q8N2I9 435 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 UBL4BQ8N7F7 174 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 OR2A12Q8NGT7 310 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 RLN3Q8WXF3 142 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms