RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 MOCOSQ96EN8 888 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 HNRNPABQ99729 332 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 SEMA6AQ9H2E6 1030 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 COG4Q9H9E3 785 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 MID1IP1Q9NPA3 183 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ADAMTS5Q9UNA0 930 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 SLC12A4Q9UP95 1085 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PSAT1Q9Y617 370 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 DDX60LQ5H9U9 1706 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TTC24A2A3L6 582 aaPredicted RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 PEX1O43933 1283 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 KATNA1O75449 491 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 ASGR1P07306 291 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 IL10P22301 178 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TKTP29401 623 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 CXCR3P49682 368 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 CACNA2D1P54289 1103 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 ENPEPQ07075 957 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 GRM3Q14832 879 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TCEAL1Q15170 157 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 DPYSL2Q16555 572 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 LRRC8BQ6P9F7 803 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 OSTM1Q86WC4 334 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 CNDP1Q96KN2 507 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 CADM1Q9BY67 442 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 COPG2Q9UBF2 871 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 UXTQ9UBK9 157 aaPredicted RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TRMT6Q9UJA5 497 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TEX264Q9Y6I9 313 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 C2orf81A6NN90 581 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 F8W8V4 182 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 GCATO75600 419 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TCEA3O75764 348 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 BEST1O76090 585 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 RHOCP08134 193 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 MBL2P11226 248 aaPredicted RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TFEBP19484 476 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 FGFR3P22607 806 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 PTPN3P26045 913 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 FMO4P31512 558 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 GABRB2P47870 512 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 SERPINH1P50454 418 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 DAOAP59103 153 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 PLOD1Q02809 727 aaPredicted RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 SOX4Q06945 474 aaPredicted RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 DDX39BQ13838 428 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 NCBP2-AS2Q69YL0 99 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 DDI1Q8WTU0 396 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 C10orf82Q8WW14 230 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 CYGBQ8WWM9 190 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 SOCS4Q8WXH5 440 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TM6SF2Q9BZW4 377 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 FBXO44Q9H4M3 255 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 COPS7BQ9H9Q2 264 aaPredicted RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 BPIFA1Q9NP55 256 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TLR8Q9NR97 1041 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 IGKV6D-21A0A0A0MT36 114 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 A0A1W2PQH9 124 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 HEATR9A2RTY3 570 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 C9JVG2 144 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 PLIN3O60664 434 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TOMM70O94826 608 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TBX18O95935 607 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 NFKBIAP25963 317 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 CRHR1P34998 444 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 SLC5A3P53794 718 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 CCL23P55773 120 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 GALNT3Q14435 633 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 ARHGEF6Q15052 776 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 ARFGAP1Q8N6T3 406 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 DCBLD1Q8N8Z6 715 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 APBB2Q92870 758 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 OLA1Q9NTK5 396 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 AK5Q9Y6K8 562 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 COL1A2P08123 1366 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 KIAA0100Q14667 2235 aaKnown RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TSHRP16473 764 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TPSB2P20231 275 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TPSAB1Q15661 275 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TAPT1Q6NXT6 567 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 HPS6Q86YV9 775 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 ZNF398Q8TD17 642 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 GDPD5Q8WTR4 605 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 PBXIP1Q96AQ6 731 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 NXNL1Q96CM4 212 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 ERLEC1Q96DZ1 483 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 ENTPD7Q9NQZ7 604 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 TBC1D13Q9NVG8 400 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.18□□□□□ -0.62
COL27A1-204ENST00000477421 DERAQ9Y315 318 aa11.18□□□□□ -0.62
COL27A1-204ENST00000477421 NEMP2A6NFY4 417 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 RBP1P09455 135 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 CLDN10P78369 228 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 DUSP4Q13115 394 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 KCNJ11Q14654 390 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 RALGPS1Q5JS13 557 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 DNAJC14Q6Y2X3 702 aaPredicted RBP11.17□□□□□ -0.62
COL27A1-204ENST00000477421 SZRD1Q7Z422 152 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 LZTR1Q8N653 840 aa11.17□□□□□ -0.62
COL27A1-204ENST00000477421 TMEM40Q8WWA1 233 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms