RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 WBP2Q969T9 261 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 E2F7Q96AV8 911 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 LRRC39Q96DD0 335 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 RIPOR3Q96MK2 946 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 CEP41Q9BYV8 373 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 SMG9Q9H0W8 520 aaKnown RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 NOL6Q9H6R4 1146 aaKnown RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 LRRC40Q9H9A6 602 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 THG1LQ9NWX6 298 aaKnown RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 GDE1Q9NZC3 331 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF212Q9UDV6 495 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 TRIOO75962 3097 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 KDELR3O43731 214 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 GREM1O60565 184 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 IVLP07476 585 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 TSHRP16473 764 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 NFKB1P19838 968 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 MMP13P45452 471 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 IFNAR2P48551 515 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 ZP2Q05996 745 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 ZBTB17Q13105 803 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 USP4Q13107 963 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 LBRQ14739 615 aaKnown RBP12.46□□□□□ -0.41
MRPL55-227ENST00000475832 BBS9Q3SYG4 887 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 ARTNQ5T4W7 220 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 IER5LQ5T953 404 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 FAXCQ5TGI0 409 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 NAPEPLDQ6IQ20 393 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 ARHGAP36Q6ZRI8 547 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
MRPL55-227ENST00000475832 ADHFE1Q8IWW8 467 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 PALM2Q8IXS6 379 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 ZBED8Q8IZ13 594 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 MYEOVQ96EZ4 313 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 FCRL5Q96RD9 977 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 C2orf49Q9BVC5 232 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-227ENST00000475832 TXLNGYQ9BZA5 131 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 GLOD4Q9HC38 313 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 FAM86C1Q9NVL1 165 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 KIAA1522Q9P206 1035 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-227ENST00000475832 SEPT3Q9UH03 358 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 VPS28Q9UK41 221 aa12.46□□□□□ -0.41
MRPL55-227ENST00000475832 USP15Q9Y4E8 981 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-227ENST00000475832 CACNA1BQ00975 2339 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 SCAMP3O14828 347 aaKnown RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 ALOX15BO15296 676 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 TP73O15350 636 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 SPAG6O75602 509 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 TMEM63AO94886 807 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 AP2A1O95782 977 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 TTC4O95801 387 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 CPP00450 1065 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 CES1P23141 567 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 ACVRL1P37023 503 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 ZXDBP98169 803 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 ZNF77Q15935 545 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 CCDC38Q502W7 563 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 ANKRD22Q5VYY1 191 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 RETSATQ6NUM9 610 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 TPGS1Q6ZTW0 290 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 GET4Q7L5D6 327 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 CCNJLQ8IV13 435 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 SUGP1Q8IWZ8 645 aaKnown RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 ATP11CQ8NB49 1132 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 TSEN2Q8NCE0 465 aaKnown RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 ATOH1Q92858 354 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 SMARCD2Q92925 531 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 SERPINB12Q96P63 405 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 CINPQ9BW66 212 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 POLR1EQ9GZS1 481 aaKnown RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 IRF2BPLQ9H1B7 796 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 SLC25A51Q9H1U9 297 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 CDC42EP4Q9H3Q1 356 aaKnown RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 NT5MQ9NPB1 228 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 VPS45Q9NRW7 570 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 DNAJC17Q9NVM6 304 aaKnown RBP12.45□□□□□ -0.42
MRPL55-227ENST00000475832 OBP2AQ9NY56 170 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 CCL26Q9Y258 94 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 PLAAQ9Y263 795 aa12.45□□□□□ -0.42
MRPL55-227ENST00000475832 A0A087WUV0 522 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-227ENST00000475832 E7ESA3 106 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 J3KR12 359 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 CBX4O00257 560 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 GFRA2O00451 464 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 RIPK2O43353 540 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 PRAMEF12O95522 483 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 ADH1CP00326 375 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 GSTA2P09210 222 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 NUDT17P0C025 328 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 MTHFRP42898 656 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 SGSHP51688 502 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 TNK2Q07912 1038 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 TCF15Q12870 199 aa12.44□□□□□ -0.42
MRPL55-227ENST00000475832 MPP3Q13368 585 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms