RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 C9orf64Q5T6V5 341 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 AFMIDQ63HM1 303 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 ZNF776Q68DI1 518 aaPredicted RBP15.43■□□□□ 0.06
SNX13-207ENST00000475800 ZNF662Q6ZS27 426 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 LRRC49Q8IUZ0 686 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 PCDH20Q8N6Y1 951 aaKnown RBP15.43■□□□□ 0.06
SNX13-207ENST00000475800 ZNF366Q8N895 744 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 PTPRN2Q92932 1015 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 ISG20Q96AZ6 181 aaKnown RBP15.43■□□□□ 0.06
SNX13-207ENST00000475800 FAF2Q96CS3 445 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 SIPA1Q96FS4 1042 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 HMCESQ96FZ2 354 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 PDLIM2Q96JY6 352 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 RTKNQ9BST9 563 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 KLC2Q9H0B6 622 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 DUSP10Q9Y6W6 482 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 THADAQ6YHU6 1953 aa15.43■□□□□ 0.06
SNX13-207ENST00000475800 MACROD2A1Z1Q3 448 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 RPP40O75818 363 aaKnown RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 MT-CO1P00395 513 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 KRT1P04264 644 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 ACADMP11310 421 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 GLDCP23378 1020 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 IL4RP24394 825 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 RECQLP46063 649 aaPredicted RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 NUMBP49757 651 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 COPAP53621 1224 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 TTC31Q49AM3 519 aaPredicted RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 AASDHQ4L235 1098 aaPredicted RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 INO80DQ53TQ3 878 aaPredicted RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 ANKRD20A8PQ5CZ79 823 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 C22orf39Q6P5X5 142 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 KIAA1324Q6UXG2 1013 aaKnown RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 KBTBD6Q86V97 674 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 PLPP6Q8IY26 295 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 OR8D1Q8WZ84 308 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 RAPGEF5Q92565 580 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 TPSD1Q9BZJ3 242 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 MKRN2Q9H000 416 aaKnown RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 RSPH9Q9H1X1 276 aaPredicted RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 INVSQ9Y283 1065 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 CEP192Q8TEP8 1941 aa15.42■□□□□ 0.06
SNX13-207ENST00000475800 TPRP12270 2363 aaKnown RBP15.42■□□□□ 0.06
SNX13-207ENST00000475800 GON4LQ3T8J9 2241 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 CCDC66A2RUB6 948 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 DFFAO00273 331 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 PRAMEF11O60813 436 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 DNTTP04053 509 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 CD48P09326 243 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 TNNT1P13805 278 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 ZFXP17010 805 aaPredicted RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 P2RY2P41231 377 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 PAPOLAP51003 745 aaKnown RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 MMRN1Q13201 1228 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 PAFAH1B3Q15102 231 aaKnown RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 CSRP2Q16527 193 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 PPM1JQ5JR12 505 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 LINGO4Q6UY18 593 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 SLC36A4Q6YBV0 504 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 ARHGAP12Q8IWW6 846 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 KATNAL2Q8IYT4 538 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 NPWQ8N729 165 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 LRRC57Q8N9N7 239 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 PCDH19Q8TAB3 1148 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 NETO1Q8TDF5 533 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 RBM41Q96IZ5 413 aaKnown RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 CELF6Q96J87 481 aaKnown RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 RNF157Q96PX1 679 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 MAK16Q9BXY0 300 aaKnown RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 SLC39A8Q9C0K1 460 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 SP110Q9HB58 689 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 KLHL11Q9NVR0 708 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 UBA2Q9UBT2 640 aaPredicted RBP15.41■□□□□ 0.06
SNX13-207ENST00000475800 HYOU1Q9Y4L1 999 aa15.41■□□□□ 0.06
SNX13-207ENST00000475800 GRID2IPA4D2P6 1211 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 MIF4GDA9UHW6 222 aaKnown RBP15.4■□□□□ 0.06
SNX13-207ENST00000475800 C1QTNF3-AMACRE9PGA6 284 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 MCF2LO15068 1137 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 ZRANB2O95218 330 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX13-207ENST00000475800 ADH1BP00325 375 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 OXTRP30559 389 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
SNX13-207ENST00000475800 RPS14P62263 151 aaKnown RBP15.4■□□□□ 0.06
SNX13-207ENST00000475800 SNRPD1P62314 119 aaKnown RBP15.4■□□□□ 0.06
SNX13-207ENST00000475800 IL10RBQ08334 325 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 RFTN1Q14699 578 aaPredicted RBP15.4■□□□□ 0.06
SNX13-207ENST00000475800 TMCO4Q5TGY1 634 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 FAM46CQ5VWP2 391 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 Q6ZVU0 165 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 RCOR2Q8IZ40 523 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 STK40Q8N2I9 435 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 C12orf50Q8NA57 414 aaPredicted RBP15.4■□□□□ 0.06
SNX13-207ENST00000475800 EXD1Q8NHP7 514 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 MTG2Q9H4K7 406 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 ITM2CQ9NQX7 267 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 RXFP3Q9NSD7 469 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 ETNK2Q9NVF9 386 aa15.4■□□□□ 0.06
SNX13-207ENST00000475800 USP36Q9P275 1121 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms