RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 EIF3CQ99613 913 aaKnown RBP24.51■■□□□ 1.51
CPNE1-223ENST00000475146 NCAPGQ9BPX3 1015 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 NUP85Q9BW27 656 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 DEF6Q9H4E7 631 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 ADAMTS9Q9P2N4 1935 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 PCDH15Q96QU1 1955 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 WASH4PA8MWX3 477 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 KPNA3O00505 521 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-223ENST00000475146 TM4SF5O14894 197 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 PRNPP04156 253 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 IGHV4-34P06331 123 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 CD27P26842 260 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 CNTN1Q12860 1018 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 GRIK2Q13002 908 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 PPP6R3Q5H9R7 873 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-223ENST00000475146 DPY19L3Q6ZPD9 716 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 MINDY1Q8N5J2 469 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 OR2I1PQ8NGU4 316 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 KCTD15Q96SI1 283 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-223ENST00000475146 DNAJC7Q99615 494 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 TM6SF2Q9BZW4 377 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 NOL6Q9H6R4 1146 aaKnown RBP24.5■■□□□ 1.51
CPNE1-223ENST00000475146 IL36AQ9UHA7 158 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 ANAPC7Q9UJX3 599 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 SLCO1B1Q9Y6L6 691 aa24.5■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3DA0A087WVF3 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3IA0A087WXS9 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3EA0A087X179 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3KA0A087X1G2 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3FA6NER0 549 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3LB9A6J9 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 RASA4BC9J798 803 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 SLC7A4O43246 635 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 DAPK3O43293 454 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 RASA4O43374 803 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 BUB1O43683 1085 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 KDELR3O43731 214 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 CYP1A2P05177 515 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3HP0C7X1 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 YBEYP58557 167 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-223ENST00000475146 FOXK2Q01167 660 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 ACAP1Q15027 740 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 CARD16Q5EG05 197 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3GQ6DHY5 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3CQ6IPX1 549 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TBC1D3Q8IZP1 549 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-223ENST00000475146 RYBPQ8N488 228 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TMIEQ8NEW7 156 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 ARHGEF26Q96DR7 871 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 HMCESQ96FZ2 354 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 BTBD6Q96KE9 485 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 TM9SF3Q9HD45 589 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 DYRK4Q9NR20 520 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 DONSONQ9NYP3 566 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 IP6K2Q9UHH9 426 aa24.49■■□□□ 1.51
CPNE1-223ENST00000475146 CXorf51AA0A1B0GTR3 108 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 MED19A0JLT2 244 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-223ENST00000475146 ZSCAN5CA6NGD5 496 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-223ENST00000475146 MFAP3LO75121 409 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 ZNF821O75541 412 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-223ENST00000475146 CD160O95971 181 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 PCK1P35558 622 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 AFF3P51826 1226 aaKnown RBP24.48■■□□□ 1.51
CPNE1-223ENST00000475146 PIGHQ14442 188 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-223ENST00000475146 TEAD4Q15561 434 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 PARP15Q460N3 678 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 ARSIQ5FYB1 569 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 AGBL4Q5VU57 503 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 CYP4V2Q6ZWL3 525 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-223ENST00000475146 PSTKQ8IV42 348 aaKnown RBP24.48■■□□□ 1.51
CPNE1-223ENST00000475146 C1orf216Q8TAB5 229 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 CHD5Q8TDI0 1954 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 DCHS1Q96JQ0 3298 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 TRIM5Q9C035 493 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 ZDHHC5Q9C0B5 715 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 ZWILCHQ9H900 591 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 ABHD10Q9NUJ1 306 aa24.48■■□□□ 1.51
CPNE1-223ENST00000475146 PLRG1O43660 514 aaKnown RBP24.47■■□□□ 1.51
CPNE1-223ENST00000475146 OPHN1O60890 802 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 LEFTY1O75610 366 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 CSNK1EP49674 416 aaKnown RBP24.47■■□□□ 1.51
CPNE1-223ENST00000475146 CCNHP51946 323 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-223ENST00000475146 ADKP55263 362 aaKnown RBP24.47■■□□□ 1.51
CPNE1-223ENST00000475146 SLC18A3Q16572 532 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 SMTNL2Q2TAL5 461 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 RFX8Q6ZV50 586 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 UMODL1-AS1Q8N2C9 162 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 FAM131CQ96AQ9 280 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 ISG20Q96AZ6 181 aaKnown RBP24.47■■□□□ 1.51
CPNE1-223ENST00000475146 ARRDC3Q96B67 414 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 HEPHQ9BQS7 1158 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 NENFQ9UMX5 172 aa24.47■■□□□ 1.51
CPNE1-223ENST00000475146 A0A1B0GVT2 93 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 A0A1W2PPC4 97 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 SSU72P8A0A1W2PR75 194 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 AKR1B10O60218 316 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 IL1R2P27930 398 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 CCR5P51681 352 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 PPP2CBP62714 309 aa24.46■■□□□ 1.51
CPNE1-223ENST00000475146 PPP2CAP67775 309 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms