RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 CCDC110Q8TBZ0 833 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 CCHCR1Q8TD31 782 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 CASKIN2Q8WXE0 1202 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 MAML1Q92585 1016 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 SLCO2A1Q92959 643 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 FATE1Q969F0 183 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 CHFRQ96EP1 664 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 ALG14Q96F25 216 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 EXOC2Q96KP1 924 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 LMLNQ96KR4 655 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 SPATA13Q96N96 652 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 AGAP3Q96P47 875 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 TRIM31Q9BZY9 425 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 RAB17Q9H0T7 212 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 NT5MQ9NPB1 228 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 RBM22Q9NW64 420 aaKnown RBP eCLIP8.49□□□□□ -1.051e-5■■■■□ 22.7
CNN3-205ENST00000474409 PAK5Q9P286 719 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 SEPT3Q9UH03 358 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 CA14Q9ULX7 337 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 SLC8A2Q9UPR5 921 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 FCF1Q9Y324 198 aaKnown RBP8.49□□□□□ -1.05
CNN3-205ENST00000474409 UTP11Q9Y3A2 253 aaKnown RBP8.49□□□□□ -1.05
CNN3-205ENST00000474409 NCOR1O75376 2440 aa8.49□□□□□ -1.05
CNN3-205ENST00000474409 UNC80Q8N2C7 3258 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ZFC3H1O60293 1989 aaKnown RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 GOLGA6CA6NDK9 693 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 GOLGA6BA6NDN3 693 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 C19orf67A6NJJ6 358 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 F5H423 210 aaPredicted RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 ZMPSTE24O75844 475 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 DLDP09622 509 aaKnown RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 RHOXF2BP0C7M4 288 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ZSCAN5DPP0CG00 497 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 GOLGA6DP0CG33 693 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ETS1P14921 441 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 GLULP15104 373 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 NFKB1P19838 968 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 PSMB4P28070 264 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 HSPA9P38646 679 aaKnown RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 GRIA2P42262 883 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 PTGIRP43119 386 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 RECQLP46063 649 aaPredicted RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 TERF1P54274 439 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 NRLP54845 237 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 SEC13P55735 322 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 BASP1P80723 227 aaKnown RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 SLC10A7Q0GE19 358 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 WASHC5Q12768 1159 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 GRSF1Q12849 480 aaKnown RBP eCLIP8.48□□□□□ -1.05
CNN3-205ENST00000474409 GPS1Q13098 491 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 E2F5Q15329 346 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 KCTD19Q17RG1 926 aaPredicted RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 ACCSLQ4AC99 568 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 GLE1Q53GS7 698 aaKnown RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 TEX44Q53QW1 395 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 INO80DQ53TQ3 878 aaPredicted RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 ANKRD20A2Q5SQ80 823 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ANKRD20A1Q5TYW2 823 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ANKRD20A3Q5VUR7 823 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 TMEM215Q68D42 235 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 C22orf39Q6P5X5 142 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 TXNDC11Q6PKC3 985 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 PID1Q7Z2X4 250 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 KIAA0907Q7Z7F0 614 aaPredicted RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 PRUNE1Q86TP1 453 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 RNF135Q8IUD6 432 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ZNF567Q8N184 647 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 PHTF2Q8N3S3 785 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 TAB3Q8N5C8 712 aaPredicted RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 SH2D3CQ8N5H7 860 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.48□□□□□ -1.05
CNN3-205ENST00000474409 GLIS1Q8NBF1 620 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 SORCS1Q8WY21 1168 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 UBXN4Q92575 508 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 TTC17Q96AE7 1141 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 RTP4Q96DX8 246 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 RPL10LQ96L21 214 aaKnown RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 IL12RB2Q99665 862 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 RHOXF2Q9BQY4 288 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 LRRC1Q9BTT6 524 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 TM6SF2Q9BZW4 377 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 POLR1EQ9GZS1 481 aaKnown RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 GBA3Q9H227 469 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 USP29Q9HBJ7 922 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ARHGEF3Q9NR81 526 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ELOVL2Q9NXB9 296 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 GOLGA6AQ9NYA3 693 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.48□□□□□ -1.05
CNN3-205ENST00000474409 TRHDEQ9UKU6 1024 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ERVW-1Q9UQF0 538 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 HS3ST2Q9Y278 367 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 ACTL7AQ9Y615 435 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 V9GYY5 206 aaPredicted RBP8.48□□□□□ -1.05
CNN3-205ENST00000474409 NUMA1Q14980 2115 aa8.48□□□□□ -1.05
CNN3-205ENST00000474409 CXorf51AA0A1B0GTR3 108 aa8.47□□□□□ -1.05
CNN3-205ENST00000474409 C5orf60A6NFR6 353 aa8.47□□□□□ -1.05
CNN3-205ENST00000474409 PRRT4C9JH25 899 aa8.47□□□□□ -1.05
CNN3-205ENST00000474409 E7EVH7 732 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms