RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ADI1Q9BV57 179 aa18.9■□□□□ 0.62
ECHDC1-214ENST00000474289 ACE2Q9BYF1 805 aaPredicted RBP18.9■□□□□ 0.62
ECHDC1-214ENST00000474289 ELOVL4Q9GZR5 314 aa18.9■□□□□ 0.62
ECHDC1-214ENST00000474289 MRPL40Q9NQ50 206 aaKnown RBP18.9■□□□□ 0.62
ECHDC1-214ENST00000474289 ZNF839A8K0R7 811 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 CFAP99D6REC4 459 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 POLBP06746 335 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 BMP2P12643 396 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 NAGLUP54802 743 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 NME5P56597 212 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 RPS3AP61247 264 aaKnown RBP18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 TRAP1Q12931 704 aaKnown RBP18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 MAP7D1Q3KQU3 841 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 OLFML1Q6UWY5 402 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 ZNF354CQ86Y25 554 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 HACE1Q8IYU2 909 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM130Q8N3G9 435 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 CBR4Q8N4T8 237 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 MFSD2AQ8NA29 543 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 CASP10Q92851 521 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 PBXIP1Q96AQ6 731 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 AGAP2Q99490 1192 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 NAT9Q9BTE0 207 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 CCDC68Q9H2F9 335 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 SLC38A10Q9HBR0 1119 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 VTI1BQ9UEU0 232 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 A0A0A0MRY4 1105 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 MPOP05164 745 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 TFE3P19532 575 aaPredicted RBP18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 GNA12Q03113 381 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 NME3Q13232 169 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 ABHD15Q6UXT9 468 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 LSMEM2Q8N112 164 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 TERB1Q8NA31 727 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 COLGALT1Q8NBJ5 622 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 ACVR1CQ8NER5 493 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 C17orf50Q8WW18 174 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 TRUB1Q8WWH5 349 aaKnown RBP18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 HTR3CQ8WXA8 447 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 GPRASP2Q96D09 838 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 SPATA13Q96N96 652 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 TCF12Q99081 682 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 BCO2Q9BYV7 579 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 MAGEB5Q9BZ81 275 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 MUC3BQ9H195 1237 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 CACNA2D2Q9NY47 1150 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 MAP3K20Q9NYL2 800 aaKnown RBP18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 SFMBT1Q9UHJ3 866 aa18.89■□□□□ 0.61
ECHDC1-214ENST00000474289 SNAP91O60641 907 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 OXSR1O95747 527 aaPredicted RBP18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 KRT19P08727 400 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 NFATC3Q12968 1075 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM110Q86TL2 294 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 VSIG10LQ86VR7 867 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 CANT1Q8WVQ1 401 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 STON2Q8WXE9 905 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 TBCBQ99426 244 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 IL22Q9GZX6 179 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 MFHAS1Q9Y4C4 1052 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM233B4DJY2 109 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 SLCO1B7G3V0H7 640 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 MDM4O15151 490 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 RGS20O76081 388 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 CLIC3O95833 236 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 SBK3P0C264 359 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 HDCP19113 662 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 KPNA1P52294 538 aaPredicted RBP18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 MERTKQ12866 999 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 TRAF2Q12933 501 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 ITGADQ13349 1161 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 CAPSQ13938 189 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 LRP8Q14114 963 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 SLC2A7Q6PXP3 512 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 ZYG11AQ6WRX3 759 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 EPHX4Q8IUS5 362 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 ZC3H7AQ8IWR0 971 aaKnown RBP18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 SIX6OS1Q8N1H7 587 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM151AQ8N4L1 468 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 ERLEC1Q96DZ1 483 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 SNX27Q96L92 541 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM134Q9H6X4 195 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 SPAG4Q9NPE6 437 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 DTLQ9NZJ0 730 aa18.88■□□□□ 0.61
ECHDC1-214ENST00000474289 TRIP11Q15643 1979 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 MGAMO43451 1857 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 SPTLC1O15269 473 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 DGKDQ16760 1214 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 ZNF667Q5HYK9 610 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 SNRNP48Q6IEG0 339 aaKnown RBP18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 ERMP1Q7Z2K6 904 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 HMGCLL1Q8TB92 370 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 CEP41Q9BYV8 373 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 TASP1Q9H6P5 420 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 CD300AQ9UGN4 299 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM98Q9Y2Y6 226 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 SLC30A1Q9Y6M5 507 aa18.87■□□□□ 0.61
ECHDC1-214ENST00000474289 DYNC1LI2O43237 492 aaPredicted RBP18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 CNOT3O75175 753 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms