RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 SPATA31A7Q8IWB4 1347 aa3.91□□□□□ -1.78
TMEM50B-208ENST00000474272 VWA3AA6NCI4 1184 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 NPIPB13A6NJU9 1138 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 NPIPB4C9JG80 1138 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 ZNF432O94892 652 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 ALDOCP09972 364 aaKnown RBP3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 KRT10P13645 584 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 CPA1P15085 419 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 PRPH2P23942 346 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 PNPLA4P41247 253 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 RFX2P48378 723 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 PCP4P48539 62 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 COMPP49747 757 aaPredicted RBP3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 EGR4Q05215 589 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 CHRNDQ07001 517 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 CDK18Q07002 472 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 IZUMO4Q1ZYL8 232 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 TMEM88Q6PEY1 159 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 MMS22LQ6ZRQ5 1243 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 Q6ZTK2 550 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 ZFPM2Q8WW38 1151 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 KAT2AQ92830 837 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 RBM17Q96I25 401 aaKnown RBP3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 MAELQ96JY0 434 aaKnown RBP3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 ZNF347Q96SE7 839 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 REEP2Q9BRK0 252 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 HDHD5Q9BXW7 423 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 OSBPL5Q9H0X9 879 aaPredicted RBP3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 MAP6D1Q9H9H5 199 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 CD93Q9NPY3 652 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 SLC22A11Q9NSA0 550 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 HIF1ANQ9NWT6 349 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 IFT80Q9P2H3 777 aaPredicted RBP3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 CRYL1Q9Y2S2 319 aa3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 ZNF335Q9H4Z2 1342 aaPredicted RBP3.9□□□□□ -1.79
TMEM50B-208ENST00000474272 INAFM1C9JVW0 142 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 SEPT4O43236 478 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 HOXC11O43248 304 aaPredicted RBP3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 IFNA2P01563 188 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 RFX5P48382 616 aaPredicted RBP3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 TLE2Q04725 743 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 THOC5Q13769 683 aaKnown RBP3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 ANKRD1Q15327 319 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 KIAA1755Q5JYT7 1200 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 ISM2Q6H9L7 571 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 CCDC70Q6NSX1 233 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 PRSS57Q6UWY2 283 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 MDGA2Q7Z553 956 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 ESX1Q8N693 406 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 ADPRHL1Q8NDY3 354 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 HTRA1Q92743 480 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 ABHD14AQ9BUJ0 271 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 SEZ6LQ9BYH1 1024 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 NOD2Q9HC29 1040 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 SPAG4Q9NPE6 437 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 TLR8Q9NR97 1041 aaKnown RBP3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 PLK2Q9NYY3 685 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 PCDHGB1Q9Y5G3 927 aa3.89□□□□□ -1.79
TMEM50B-208ENST00000474272 SAC3D1A6NKF1 404 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 KLK10O43240 276 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 PLGP00747 810 aaPredicted RBP3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 HOXC6P09630 235 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 TGM2P21980 687 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 AVPR2P30518 371 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 LIFRP42702 1097 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 GAS1P54826 345 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 TRAF1Q13077 416 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 GXYLT1Q4G148 440 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 GLE1Q53GS7 698 aaKnown RBP3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 CBWD5Q5RIA9 395 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 JAKMIP3Q5VZ66 844 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 ATG16L1Q676U5 607 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 GSG1LQ6UXU4 331 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 HEATR4Q86WZ0 1026 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 SCN4BQ8IWT1 228 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 ENDOVQ8N8Q3 282 aaKnown RBP3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 USP38Q8NB14 1042 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 KCNJ9Q92806 393 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 GPR63Q9BZJ6 419 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 SFXN1Q9H9B4 322 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 TXNRD2Q9NNW7 524 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 WASH6PQ9NQA3 447 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 NCKIPSDQ9NZQ3 722 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 WNT16Q9UBV4 365 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 PLEKHB1Q9UF11 243 aaPredicted RBP3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 ERRFI1Q9UJM3 462 aaPredicted RBP3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 ICAM5Q9UMF0 924 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 SLC8A2Q9UPR5 921 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 PKP3Q9Y446 797 aa3.88□□□□□ -1.79
TMEM50B-208ENST00000474272 C17orf100A8MU93 164 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 PEX12O00623 359 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 MDM4O15151 490 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 LINC01565O15544 149 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 DDNO94850 711 aaPredicted RBP3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 NFATC1O95644 943 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 ARSAP15289 507 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 TUBP50607 506 aa3.87□□□□□ -1.79
TMEM50B-208ENST00000474272 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms