RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 PSMA2P25787 234 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 AIF1P55008 147 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TEAD4Q15561 434 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 KIF19Q2TAC6 998 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 SKOR2Q2VWA4 1001 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-203ENST00000474056 HLA-BQ31612 363 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3GQ6DHY5 549 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3CQ6IPX1 549 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 DPY19L3Q6ZPD9 716 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 TBC1D3Q8IZP1 549 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-203ENST00000474056 ARRDC3Q96B67 414 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 MAGEH1Q9H213 219 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 SLC32A1Q9H598 525 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 GPATCH2LQ9NWQ4 482 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 ANKRD6Q9Y2G4 727 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 FNDC3AQ9Y2H6 1198 aaKnown RBP18.31■□□□□ 0.52
UPF3A-203ENST00000474056 SNX11Q9Y5W9 270 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 ANKRD36A6QL64 1941 aa18.31■□□□□ 0.52
UPF3A-203ENST00000474056 KPNA3O00505 521 aaPredicted RBP18.3■□□□□ 0.52
UPF3A-203ENST00000474056 SLC7A4O43246 635 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 RAMP2O60895 175 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 DESP17661 470 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 EPHB2P29323 1055 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 ETFBP38117 255 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 CCR5P51681 352 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 RACK1P63244 317 aaKnown RBP18.3■□□□□ 0.52
UPF3A-203ENST00000474056 SLC20A2Q08357 652 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 SLC14A1Q13336 389 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 KCNT1Q5JUK3 1230 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 IL27RAQ6UWB1 636 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 ADAT2Q7Z6V5 191 aaKnown RBP18.3■□□□□ 0.52
UPF3A-203ENST00000474056 ARFGAP1Q8N6T3 406 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 PCDH20Q8N6Y1 951 aaKnown RBP18.3■□□□□ 0.52
UPF3A-203ENST00000474056 RTL3Q8N8U3 475 aaKnown RBP18.3■□□□□ 0.52
UPF3A-203ENST00000474056 TMIEQ8NEW7 156 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 GRIN3AQ8TCU5 1115 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 CPLX3Q8WVH0 158 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 CAMK1GQ96NX5 476 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 CEP44Q9C0F1 390 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 NOL6Q9H6R4 1146 aaKnown RBP18.3■□□□□ 0.52
UPF3A-203ENST00000474056 IL36AQ9UHA7 158 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 WASF2Q9Y6W5 498 aa18.3■□□□□ 0.52
UPF3A-203ENST00000474056 TDRD6O60522 2096 aaKnown RBP18.29■□□□□ 0.52
UPF3A-203ENST00000474056 TMEM191CA6NGB0 347 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 WNT9AO14904 365 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 SH3BP5O60239 455 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 LEFTY1O75610 366 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 PRNPP04156 253 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 WNT1P04628 370 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 RECQLP46063 649 aaPredicted RBP18.29■□□□□ 0.52
UPF3A-203ENST00000474056 DNA2P51530 1060 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 TAS2R38P59533 333 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 FAM193AP78312 1265 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 ZBED6P86452 979 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 POLD3Q15054 466 aaPredicted RBP18.29■□□□□ 0.52
UPF3A-203ENST00000474056 PIP5KL1Q5T9C9 394 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 PEBP4Q96S96 227 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 EPAS1Q99814 870 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 TM6SF2Q9BZW4 377 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 XPO4Q9C0E2 1151 aaKnown RBP18.29■□□□□ 0.52
UPF3A-203ENST00000474056 ISCUQ9H1K1 167 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 KDM4CQ9H3R0 1056 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 TM7SF3Q9NS93 570 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 MYO1AQ9UBC5 1043 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 CAPN11Q9UMQ6 739 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 AP4E1Q9UPM8 1137 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 SCINQ9Y6U3 715 aa18.29■□□□□ 0.52
UPF3A-203ENST00000474056 CXorf51AA0A1B0GTR3 108 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 SPAARA0A1B0GVQ0 90 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 WASH4PA8MWX3 477 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 LATO43561 262 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 GYPCP04921 128 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 ZNF883P0CG24 379 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 MAT2AP31153 395 aaKnown RBP18.28■□□□□ 0.52
UPF3A-203ENST00000474056 CCNHP51946 323 aaPredicted RBP18.28■□□□□ 0.52
UPF3A-203ENST00000474056 CA9Q16790 459 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 CARD16Q5EG05 197 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 ARSIQ5FYB1 569 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 NAXDQ8IW45 347 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 FNIP1Q8TF40 1166 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 SYN2Q92777 582 aaPredicted RBP18.28■□□□□ 0.52
UPF3A-203ENST00000474056 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.28■□□□□ 0.52
UPF3A-203ENST00000474056 SNRNP25Q9BV90 132 aaKnown RBP18.28■□□□□ 0.52
UPF3A-203ENST00000474056 KLC2Q9H0B6 622 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 CATSPERBQ9H7T0 1116 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 AASDHPPTQ9NRN7 309 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 ARHGAP20Q9P2F6 1191 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 PCSK1NQ9UHG2 260 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
UPF3A-203ENST00000474056 ACACBO00763 2458 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 A0A1W2PR77 199 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 KCNK3O14649 394 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 VILLO15195 856 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 MYBL1P10243 752 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 CTSKP43235 329 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 TPI1P60174 286 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 CYP4V2Q6ZWL3 525 aaPredicted RBP18.27■□□□□ 0.52
UPF3A-203ENST00000474056 TRIM69Q86WT6 500 aa18.27■□□□□ 0.52
UPF3A-203ENST00000474056 ZNF354CQ86Y25 554 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms