RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 C11orf74Q86VG3 221 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 TMEFF1Q8IYR6 380 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 NPWQ8N729 165 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 FAM71BQ8TC56 605 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 RFFLQ8WZ73 363 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 TSC1Q92574 1164 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 VOPP1Q96AW1 172 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 LOXL4Q96JB6 756 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 LRRC19Q9H756 370 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 CATSPERBQ9H7T0 1116 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 ZWILCHQ9H900 591 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 WSB2Q9NYS7 404 aaPredicted RBP12.65□□□□□ -0.38
LINC00888-202ENST00000471496 RAB23Q9ULC3 237 aa12.65□□□□□ -0.38
LINC00888-202ENST00000471496 REXO2Q9Y3B8 237 aaKnown RBP12.65□□□□□ -0.38
LINC00888-202ENST00000471496 PI4KAP42356 2102 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 CXorf51AA0A1B0GTR3 108 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 RNF103O00237 685 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ERCC2P18074 760 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 MAN1A1P33908 653 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ETFBP38117 255 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 PTGER3P43115 390 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 SERPINH1P50454 418 aaKnown RBP12.64□□□□□ -0.39
LINC00888-202ENST00000471496 METAP1P53582 386 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 YBEYP58557 167 aaPredicted RBP12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ZBTB16Q05516 673 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ELAVL3Q14576 367 aaKnown RBP12.64□□□□□ -0.39
LINC00888-202ENST00000471496 POLD3Q15054 466 aaPredicted RBP12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ZNF776Q68DI1 518 aaPredicted RBP12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ZNF787Q6DD87 383 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 IL31Q6EBC2 164 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 TMTC1Q8IUR5 882 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 SLC41A1Q8IVJ1 513 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ARHGAP12Q8IWW6 846 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 ATP11CQ8NB49 1132 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 OR2A12Q8NGT7 310 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 HSPH1Q92598 858 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 HMCESQ96FZ2 354 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 SPACA7Q96KW9 195 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 PCDH18Q9HCL0 1135 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00888-202ENST00000471496 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 NCDNQ9UBB6 729 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 SERGEFQ9UGK8 458 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 SARDHQ9UL12 918 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 MFHAS1Q9Y4C4 1052 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 PCDHA13Q9Y5I0 950 aa12.64□□□□□ -0.39
LINC00888-202ENST00000471496 DOCK9Q9BZ29 2069 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 C10orf142B7Z368 130 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 RASA4BC9J798 803 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 MCF2LO15068 1137 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 MID1O15344 667 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 RASA4O43374 803 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 KDELR3O43731 214 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 RHOBTB1O94844 696 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 NDUFA10O95299 355 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 CTSLP07711 333 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 CD48P09326 243 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 CD6P30203 668 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 MAGEA1P43355 309 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 ZNF135P52742 658 aaPredicted RBP12.63□□□□□ -0.39
LINC00888-202ENST00000471496 NDST2P52849 883 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 HADHBP55084 474 aaKnown RBP12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SLC20A2Q08357 652 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SERINC3Q13530 473 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 MESDQ14696 234 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 ELF2Q15723 593 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 CST6Q15828 149 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 ACCSLQ4AC99 568 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SPDYCQ5MJ68 293 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 DESI1Q6ICB0 168 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 RETSATQ6NUM9 610 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 C22orf39Q6P5X5 142 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SLC36A4Q6YBV0 504 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 MMAAQ8IVH4 418 aaKnown RBP12.63□□□□□ -0.39
LINC00888-202ENST00000471496 TP53INP2Q8IXH6 220 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 RHOT2Q8IXI1 618 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 AADATQ8N5Z0 425 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 NETO2Q8NC67 525 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 TOE1Q96GM8 510 aaKnown RBP12.63□□□□□ -0.39
LINC00888-202ENST00000471496 CSPG4P5Q96PW8 444 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SLC39A8Q9C0K1 460 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 PABPC3Q9H361 631 aaKnown RBP12.63□□□□□ -0.39
LINC00888-202ENST00000471496 PDFQ9HBH1 243 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 ETNK2Q9NVF9 386 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SALL4Q9UJQ4 1053 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 PPM1HQ9ULR3 514 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 EPN1Q9Y6I3 576 aaPredicted RBP12.63□□□□□ -0.39
LINC00888-202ENST00000471496 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
LINC00888-202ENST00000471496 TTC24A2A3L6 582 aaPredicted RBP12.62□□□□□ -0.39
LINC00888-202ENST00000471496 BCLAF3A2AJT9 711 aaKnown RBP12.62□□□□□ -0.39
LINC00888-202ENST00000471496 DNTTP04053 509 aa12.62□□□□□ -0.39
LINC00888-202ENST00000471496 AMPD1P23109 780 aa12.62□□□□□ -0.39
LINC00888-202ENST00000471496 SLC8A1P32418 973 aa12.62□□□□□ -0.39
LINC00888-202ENST00000471496 ACSL1P33121 698 aa12.62□□□□□ -0.39
LINC00888-202ENST00000471496 DRD3P35462 400 aa12.62□□□□□ -0.39
LINC00888-202ENST00000471496 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
LINC00888-202ENST00000471496 ARHGAP25P42331 645 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms