RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 CACNA2D2Q9NY47 1150 aa12.87□□□□□ -0.35
SND1-209ENST00000470723 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
SND1-209ENST00000470723 AMACRQ9UHK6 382 aa12.87□□□□□ -0.35
SND1-209ENST00000470723 HEY1Q9Y5J3 304 aa12.87□□□□□ -0.35
SND1-209ENST00000470723 EDDM13A0A1B0GTR0 161 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 TTC34A8MYJ7 566 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 TCP1P17987 556 aaKnown RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 PRKCHP24723 683 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 CXCL12P48061 93 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 STK19P49842 368 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 RENBPP51606 427 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 DGKEP52429 567 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 PRKD1Q15139 912 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 NOMO1Q15155 1222 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 LLGL1Q15334 1064 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 SIX1Q15475 284 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 FNDC3BQ53EP0 1204 aaKnown RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 SEL1L2Q5TEA6 688 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 TIGD7Q6NT04 549 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 SERPINA13PQ6UXR4 307 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 LINGO4Q6UY18 593 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 PCDH20Q8N6Y1 951 aaKnown RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 ATP11CQ8NB49 1132 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 SLC35B2Q8TB61 432 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 ACTL9Q8TC94 416 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 ACTRT1Q8TDG2 376 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 PSKH2Q96QS6 385 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 OSBPL9Q96SU4 736 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 FAM129BQ96TA1 746 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 IL12RB2Q99665 862 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 FBRSQ9HAH7 460 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 C2orf42Q9NWW7 574 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 UBA2Q9UBT2 640 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 SLC8A2Q9UPR5 921 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 MUC22E2RYF6 1773 aaPredicted RBP12.86□□□□□ -0.35
SND1-209ENST00000470723 ZNF318Q5VUA4 2279 aa12.86□□□□□ -0.35
SND1-209ENST00000470723 CCDC163A0A0D9SF12 145 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 K7ESF4 209 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
SND1-209ENST00000470723 MCF2LO15068 1137 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 ALOX15BO15296 676 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 CEP104O60308 925 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 ZNF189O75820 626 aaPredicted RBP12.85□□□□□ -0.35
SND1-209ENST00000470723 GSRP00390 522 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 TDGF1P13385 188 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 CCR3P51677 355 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 DYNLT1P63172 113 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 IFI35P80217 286 aaPredicted RBP12.85□□□□□ -0.35
SND1-209ENST00000470723 SLC10A7Q0GE19 358 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 DRICH1Q6PGQ1 229 aaPredicted RBP12.85□□□□□ -0.35
SND1-209ENST00000470723 C1orf210Q8IVY1 113 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 CCDC13Q8IYE1 715 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 MAML2Q8IZL2 1156 aaPredicted RBP12.85□□□□□ -0.35
SND1-209ENST00000470723 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 OR2A12Q8NGT7 310 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 MAIP1Q8WWC4 291 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 LGMNQ99538 433 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 USP29Q9HBJ7 922 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 ZDHHC4Q9NPG8 344 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 EBF1Q9UH73 591 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 DRG1Q9Y295 367 aaKnown RBP12.85□□□□□ -0.35
SND1-209ENST00000470723 ACTL7AQ9Y615 435 aa12.85□□□□□ -0.35
SND1-209ENST00000470723 SHROOM3Q8TF72 1996 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 BCLAF3A2AJT9 711 aaKnown RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 MTSS1O43312 755 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 SIN3BO75182 1162 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 TMCC1O94876 653 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 POP4O95707 220 aaKnown RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 FGGP02679 453 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 HLA-EP13747 358 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 CCNB1P14635 433 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 CR2P20023 1033 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 CES1P23141 567 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 CXCR5P32302 372 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 HSPA9P38646 679 aaKnown RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 DNA2P51530 1060 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 COPAP53621 1224 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 OTUD4Q01804 1114 aaKnown RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 LBRQ14739 615 aaKnown RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 CCNG2Q16589 344 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 MYLK3Q32MK0 819 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 SLC45A4Q5BKX6 768 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 RALGPS1Q5JS13 557 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 MARC1Q5VT66 337 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 ALG1LQ6GMV1 187 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 KIAA1211LQ6NV74 962 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 ZSCAN30Q86W11 494 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 RASSF3Q86WH2 238 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 CREG2Q8IUH2 290 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 TMIEQ8NEW7 156 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 OR2T3Q8NH03 318 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms