RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 SLC6A3Q01959 620 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 LRRC38Q5VT99 294 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 IL31Q6EBC2 164 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 SYDE1Q6ZW31 735 aaPredicted RBP18.06■□□□□ 0.48
MRPL28-208ENST00000469744 SLC26A9Q7LBE3 791 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 JAMLQ86YT9 394 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 SLC41A1Q8IVJ1 513 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 FIBINQ8TAL6 211 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 LMLNQ96KR4 655 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 HSPA12BQ96MM6 686 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 TMEM245Q9H330 911 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 MTG2Q9H4K7 406 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.06■□□□□ 0.48
MRPL28-208ENST00000469744 INTS6Q9UL03 887 aaKnown RBP18.06■□□□□ 0.48
MRPL28-208ENST00000469744 PLA2G4CQ9UP65 541 aa18.06■□□□□ 0.48
MRPL28-208ENST00000469744 KCNU1A8MYU2 1149 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 DLDP09622 509 aaKnown RBP18.05■□□□□ 0.48
MRPL28-208ENST00000469744 RARAP10276 462 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 TFE3P19532 575 aaPredicted RBP18.05■□□□□ 0.48
MRPL28-208ENST00000469744 CSKP41240 450 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 LIMK1P53667 647 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 ZNF33AQ06730 810 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 TRADDQ15628 312 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 TRIM61Q5EBN2 209 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 PPP1R15BQ5SWA1 713 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 OTUD1Q5VV17 481 aaPredicted RBP18.05■□□□□ 0.48
MRPL28-208ENST00000469744 AADACL2Q6P093 401 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 ERICH1Q86X53 443 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 CPNE8Q86YQ8 564 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 SYT12Q8IV01 421 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 NIPA2Q8N8Q9 360 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 ATP6V0D2Q8N8Y2 350 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 EXD1Q8NHP7 514 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 SIPA1Q96FS4 1042 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 ZIM3Q96PE6 472 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 ADAM33Q9BZ11 813 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 FSCN3Q9NQT6 498 aa18.05■□□□□ 0.48
MRPL28-208ENST00000469744 FEZ2Q9UHY8 353 aaPredicted RBP18.05■□□□□ 0.48
MRPL28-208ENST00000469744 C4orf47A7E2U8 309 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 F5H5T6 163 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 H0Y626 953 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 NDUFS2O75306 463 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 LUC7L3O95232 432 aaKnown RBP18.04■□□□□ 0.48
MRPL28-208ENST00000469744 CCR1P32246 355 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 CETN2P41208 172 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 TPMTP51580 245 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 PIGHQ14442 188 aaPredicted RBP18.04■□□□□ 0.48
MRPL28-208ENST00000469744 PPM1JQ5JR12 505 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 DNAJC24Q6P3W2 148 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 CCDC137Q6PK04 289 aaKnown RBP18.04■□□□□ 0.48
MRPL28-208ENST00000469744 C3orf20Q8ND61 904 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 PRCCQ92733 491 aaPredicted RBP18.04■□□□□ 0.48
MRPL28-208ENST00000469744 TOE1Q96GM8 510 aaKnown RBP18.04■□□□□ 0.48
MRPL28-208ENST00000469744 PRMT1Q99873 361 aaKnown RBP18.04■□□□□ 0.48
MRPL28-208ENST00000469744 TRIM7Q9C029 511 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 USP36Q9P275 1121 aaKnown RBP18.04■□□□□ 0.48
MRPL28-208ENST00000469744 PILRBQ9UKJ0 227 aa18.04■□□□□ 0.48
MRPL28-208ENST00000469744 GOLGA8SH3BPF8 625 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 M0QYT0 321 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 CFIP05156 583 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 ATP5BP06576 529 aaKnown RBP18.03■□□□□ 0.48
MRPL28-208ENST00000469744 CD6P30203 668 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 CTSOP43234 321 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-208ENST00000469744 IRAK1P51617 712 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 SNX16P57768 344 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 CAMK2GQ13555 558 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-208ENST00000469744 E2F5Q15329 346 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 PITRM1Q5JRX3 1037 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 FAM102AQ5T9C2 384 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-208ENST00000469744 ADAT2Q7Z6V5 191 aaKnown RBP18.03■□□□□ 0.48
MRPL28-208ENST00000469744 FAM124AQ86V42 546 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 XYLT1Q86Y38 959 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 CCDC117Q8IWD4 279 aaPredicted RBP18.03■□□□□ 0.48
MRPL28-208ENST00000469744 OR2T3Q8NH03 318 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 PIGVQ9NUD9 493 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 SLC12A6Q9UHW9 1150 aa18.03■□□□□ 0.48
MRPL28-208ENST00000469744 SLC2A3P11169 496 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 NOS2P35228 1153 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 MATKP42679 507 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 GABRB2P47870 512 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 COPS2P61201 443 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 RCOR2Q8IZ40 523 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 APCDD1Q8J025 514 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 ZNF557Q8N988 423 aaPredicted RBP18.02■□□□□ 0.48
MRPL28-208ENST00000469744 FNIP1Q8TF40 1166 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 TTC17Q96AE7 1141 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 C18orf8Q96DM3 657 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 MYO19Q96H55 970 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 TRIM51Q9BSJ1 452 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 GPR174Q9BXC1 333 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 TXLNGYQ9BZA5 131 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 NEUROG2Q9H2A3 272 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 PRSS16Q9NQE7 514 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 ITM2CQ9NQX7 267 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 ZDHHC18Q9NUE0 388 aa18.02■□□□□ 0.48
MRPL28-208ENST00000469744 NYNRINQ9P2P1 1898 aaKnown RBP18.02■□□□□ 0.47
MRPL28-208ENST00000469744 ASCC3Q8N3C0 2202 aaKnown RBP18.02■□□□□ 0.47
MRPL28-208ENST00000469744 SIGLEC16A6NMB1 481 aa18.01■□□□□ 0.47
MRPL28-208ENST00000469744 TM4SF5O14894 197 aa18.01■□□□□ 0.47
MRPL28-208ENST00000469744 PPFIA2O75334 1257 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms