RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 STK19P49842 368 aaPredicted RBP16.15■□□□□ 0.18
TSSC4-208ENST00000467308 OXCT1P55809 520 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 ZNF211Q13398 564 aaPredicted RBP16.15■□□□□ 0.18
TSSC4-208ENST00000467308 STAT4Q14765 748 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 TTC39BQ5VTQ0 682 aaPredicted RBP16.15■□□□□ 0.18
TSSC4-208ENST00000467308 FAM46CQ5VWP2 391 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 RAP1GAP2Q684P5 730 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 CHSY1Q86X52 802 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 ZNF843Q8N446 348 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 SYT11Q9BT88 431 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 COL6A6A6NMZ7 2263 aa16.15■□□□□ 0.18
TSSC4-208ENST00000467308 CAPN8A6NHC0 703 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 F5H5T6 163 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 PRAMEF26H0Y7S4 382 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 RNGTTO60942 597 aaKnown RBP16.14■□□□□ 0.17
TSSC4-208ENST00000467308 RTN2O75298 545 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 IGLV3-25P01717 112 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 PLA2G2AP14555 144 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 VAV1P15498 845 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 MAT2AP31153 395 aaKnown RBP16.14■□□□□ 0.17
TSSC4-208ENST00000467308 CLCN1P35523 988 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 GPD2P43304 727 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 ACADSBP45954 432 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 METAP1P53582 386 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 KLHL30Q0D2K2 578 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 ASTE1Q2TB18 679 aaPredicted RBP16.14■□□□□ 0.17
TSSC4-208ENST00000467308 SETMARQ53H47 684 aaPredicted RBP16.14■□□□□ 0.17
TSSC4-208ENST00000467308 ZC3H12AQ5D1E8 599 aaKnown RBP16.14■□□□□ 0.17
TSSC4-208ENST00000467308 SYPL2Q5VXT5 272 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 ZNF605Q86T29 641 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 ZNF677Q86XU0 584 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 SPACA3Q8IXA5 215 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 STK32AQ8WU08 396 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 OR8D1Q8WZ84 308 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 CHP1Q99653 195 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 PPM1HQ9ULR3 514 aa16.14■□□□□ 0.17
TSSC4-208ENST00000467308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.14■□□□□ 0.17
TSSC4-208ENST00000467308 A0A1B0GVM2 712 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 TCAF2A6NFQ2 919 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 TRIM38O00635 465 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 ALOX15BO15296 676 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 SIGLEC6O43699 453 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 MT-CO3P00414 261 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 PDGFRAP16234 1089 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 PTK2Q05397 1052 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 EIF4EBP2Q13542 120 aaPredicted RBP16.13■□□□□ 0.17
TSSC4-208ENST00000467308 AGBL4Q5VU57 503 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 CCAR2Q8N163 923 aaKnown RBP16.13■□□□□ 0.17
TSSC4-208ENST00000467308 SLC25A45Q8N413 288 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 EPS8L1Q8TE68 723 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 NHEJ1Q9H9Q4 299 aaPredicted RBP16.13■□□□□ 0.17
TSSC4-208ENST00000467308 POPDC2Q9HBU9 364 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 PREBQ9HCU5 417 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 ST7Q9NRC1 585 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 KCND1Q9NSA2 647 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.13■□□□□ 0.17
TSSC4-208ENST00000467308 SLC12A6Q9UHW9 1150 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 NOCTQ9UK39 431 aaKnown RBP16.13■□□□□ 0.17
TSSC4-208ENST00000467308 SARDHQ9UL12 918 aa16.13■□□□□ 0.17
TSSC4-208ENST00000467308 TDRD6O60522 2096 aaKnown RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 KCNU1A8MYU2 1149 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 C1QTNF3-AMACRE9PGA6 284 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 ERVH48-1M5A8F1 160 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 MCF2LO15068 1137 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 ATP9BO43861 1147 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 SDC3O75056 442 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 LCA5LO95447 670 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 TRUB2O95900 331 aaKnown RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 PNMA6AP0CW24 399 aaPredicted RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 KRT5P13647 590 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 CYP11B1P15538 503 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 CYLC1P35663 651 aaPredicted RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 CNTN1Q12860 1018 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 ATP6V0D2Q8N8Y2 350 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 TMEM145Q8NBT3 493 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 ZNF248Q8NDW4 579 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 OR4C6Q8NH72 309 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 KLHDC7BQ96G42 594 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 CCDC42Q96M95 316 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 ZNF578Q96N58 590 aaPredicted RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 ZNF830Q96NB3 372 aaPredicted RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 PRMT1Q99873 361 aaKnown RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 SLC4A5Q9BY07 1137 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 HAUS4Q9H6D7 363 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 ZKSCAN5Q9Y2L8 839 aa16.12■□□□□ 0.17
TSSC4-208ENST00000467308 EPN1Q9Y6I3 576 aaPredicted RBP16.12■□□□□ 0.17
TSSC4-208ENST00000467308 SOWAHDA6NJG2 315 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 EIF3CLB5ME19 914 aaKnown RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 CALCAP01258 141 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 SLC2A3P11169 496 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 DGKAP23743 735 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 EIF4A3P38919 411 aaKnown RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 PCBP4P57723 403 aaKnown RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 YWHAZP63104 245 aaKnown RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 CXADRP78310 365 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 DAB2P98082 770 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 CFHR1Q03591 330 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 TDRD12Q587J7 1177 aaKnown RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 RABGAP1LQ5R372 815 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 CDCP2Q5VXM1 449 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms