RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 GAREM2Q75VX8 874 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 KLHDC8BQ8IXV7 354 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 BBS5Q8N3I7 341 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 MAB21L3Q8N8X9 362 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 HJURPQ8NCD3 748 aaPredicted RBP12.38□□□□□ -0.43
LAMP3-202ENST00000466939 ARNTL2Q8WYA1 636 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 CENPTQ96BT3 561 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
LAMP3-202ENST00000466939 IL22Q9GZX6 179 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 KIF9Q9HAQ2 790 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 SMYD2Q9NRG4 433 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 HAUS2Q9NVX0 235 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 SMG5Q9UPR3 1016 aaKnown RBP12.38□□□□□ -0.43
LAMP3-202ENST00000466939 SH3BP1Q9Y3L3 701 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
LAMP3-202ENST00000466939 DOCK4Q8N1I0 1966 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 MYO18AQ92614 2054 aaKnown RBP12.37□□□□□ -0.43
LAMP3-202ENST00000466939 A0A1W2PPM1 405 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 FAM47DPA6NHR8 397 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 H3BNC9 293 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 TBL1XO60907 577 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 KRT37O76014 449 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 FGF19O95750 216 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 MYOGP15173 224 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 GJA1P17302 382 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 CD86P42081 329 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 NUMBP49757 651 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 CLCN4P51793 760 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 MAXP61244 160 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 DSC2Q02487 901 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 MGAT5Q09328 741 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 NAB1Q13506 487 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 SETD3Q86TU7 594 aaPredicted RBP12.37□□□□□ -0.43
LAMP3-202ENST00000466939 CARNMT1Q8N4J0 409 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 TEX26Q8N6G2 289 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
LAMP3-202ENST00000466939 ATXN2LQ8WWM7 1075 aaKnown RBP12.37□□□□□ -0.43
LAMP3-202ENST00000466939 IMP4Q96G21 291 aaKnown RBP12.37□□□□□ -0.43
LAMP3-202ENST00000466939 ZNF599Q96NL3 588 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 LRRC3Q9BY71 257 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 MUC3BQ9H195 1237 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 EPN3Q9H201 632 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 ATP13A1Q9HD20 1204 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 CFAP97Q9P2B7 532 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 UBA2Q9UBT2 640 aaPredicted RBP12.37□□□□□ -0.43
LAMP3-202ENST00000466939 ZNF180Q9UJW8 692 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 STOML2Q9UJZ1 356 aa12.37□□□□□ -0.43
LAMP3-202ENST00000466939 A0A0D9SEW6 157 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 ILVBLA1L0T0 632 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 MAGEB16A2A368 324 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 TRIM49D1C9J1S8 452 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 H0Y626 953 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 GRM6O15303 877 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 FAM155BO75949 473 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 KRT38O76015 456 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 ALDH1A2O94788 518 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 C1QAP02745 245 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 RB1P06400 928 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 HOXD9P28356 352 aaPredicted RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 SERPINB9P50453 376 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 WNT3AP56704 352 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 SLC7A9P82251 487 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 TNK2Q07912 1038 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 NIPAL4Q0D2K0 466 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 LRRC14Q15048 493 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 SMAD1Q15797 465 aaKnown RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 ANKRD20A4Q4UJ75 823 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 ARHGAP15Q53QZ3 475 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 RNF219Q5W0B1 726 aaPredicted RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 KDELC1Q6UW63 502 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 CYS1Q717R9 158 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 MARK2Q7KZI7 788 aaKnown RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 KDELC2Q7Z4H8 507 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 SPRED2Q7Z698 418 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 UNC5BQ8IZJ1 945 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 PPHLN1Q8NEY8 458 aaKnown RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 BCAS4Q8TDM0 211 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 ADAMTS19Q8TE59 1207 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 TTC17Q96AE7 1141 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 CERS2Q96G23 380 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 CINPQ9BW66 212 aaPredicted RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 POLR1EQ9GZS1 481 aaKnown RBP12.36□□□□□ -0.43
LAMP3-202ENST00000466939 FAM107BQ9H098 131 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 MLXIPLQ9NP71 852 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 VPS45Q9NRW7 570 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 HCFC1R1Q9NWW0 138 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 MOCS1Q9NZB8 636 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 TXNDC16Q9P2K2 825 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 SOX13Q9UN79 622 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 ZNF510Q9Y2H8 683 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 ANAPC1Q9H1A4 1944 aa12.36□□□□□ -0.43
LAMP3-202ENST00000466939 FAM237BA0A1B0GVD1 139 aa12.35□□□□□ -0.43
LAMP3-202ENST00000466939 GMNCA6NCL1 334 aa12.35□□□□□ -0.43
LAMP3-202ENST00000466939 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
LAMP3-202ENST00000466939 NDUFAB1O14561 156 aa12.35□□□□□ -0.43
LAMP3-202ENST00000466939 PRPF4O43172 522 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms