RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 DNA2P51530 1060 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 BNIP3Q12983 259 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 CLEC16AQ2KHT3 1053 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 SETMARQ53H47 684 aaPredicted RBP19.26■□□□□ 0.67
SF3A1-205ENST00000463818 RWDD4Q6NW29 188 aaKnown RBP19.26■□□□□ 0.67
SF3A1-205ENST00000463818 IQCHQ86VS3 1027 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 SPATS2Q86XZ4 545 aaKnown RBP19.26■□□□□ 0.67
SF3A1-205ENST00000463818 CENPIQ92674 756 aaPredicted RBP19.26■□□□□ 0.67
SF3A1-205ENST00000463818 KLK6Q92876 244 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 ERVMER34-1Q9H9K5 563 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 DYRK4Q9NR20 520 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 FTSJ1Q9UET6 329 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 IL36AQ9UHA7 158 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 CA5BQ9Y2D0 317 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 A0A1W2PQU0 124 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 FAM72CH0Y354 149 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 PRAMEF26H0Y7S4 382 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 TAF4O00268 1085 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 SLC31A1O15431 190 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 YKT6O15498 198 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 MAGEC1O60732 1142 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 RFC1P35251 1148 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-205ENST00000463818 ACVRL1P37023 503 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 RXRGP48443 463 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 SERPINH1P50454 418 aaKnown RBP19.25■□□□□ 0.67
SF3A1-205ENST00000463818 ARF5P84085 180 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 NRG1Q02297 640 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-205ENST00000463818 NCAPHQ15003 741 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 CARD16Q5EG05 197 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 FAM72AQ5TYM5 149 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 FAM72DQ6L9T8 149 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 NEK5Q6P3R8 708 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 WDR59Q6PJI9 974 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 ERN2Q76MJ5 926 aaKnown RBP19.25■□□□□ 0.67
SF3A1-205ENST00000463818 STRADAQ7RTN6 431 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 FAM72BQ86X60 149 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 PHF13Q86YI8 300 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-205ENST00000463818 GRIN3AQ8TCU5 1115 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 ERGIC2Q96RQ1 377 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 CEP44Q9C0F1 390 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 NDFIP2Q9NV92 336 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 ACTL7AQ9Y615 435 aa19.25■□□□□ 0.67
SF3A1-205ENST00000463818 LEFTY1O75610 366 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 LDOC1O95751 146 aaPredicted RBP19.24■□□□□ 0.67
SF3A1-205ENST00000463818 CALB1P05937 261 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 PLEKP08567 350 aaPredicted RBP19.24■□□□□ 0.67
SF3A1-205ENST00000463818 RHOQP17081 205 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 EPHA8P29322 1005 aaPredicted RBP19.24■□□□□ 0.67
SF3A1-205ENST00000463818 HDAC4P56524 1084 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 OVGP1Q12889 678 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 MANEALQ5VSG8 457 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 APTXQ7Z2E3 356 aaKnown RBP19.24■□□□□ 0.67
SF3A1-205ENST00000463818 NLRP14Q86W24 1093 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 MARCH9Q86YJ5 346 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 OXR1Q8N573 874 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 EID2Q8N6I1 236 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 CCDC185Q8N715 623 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 FAM172AQ8WUF8 416 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 KLHDC7BQ96G42 594 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 AGPAT1Q99943 283 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 HEPHQ9BQS7 1158 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 SELENOOQ9BVL4 669 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 HDAC8Q9BY41 377 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 RETREG1Q9H6L5 497 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 SEPT11Q9NVA2 429 aaKnown RBP19.24■□□□□ 0.67
SF3A1-205ENST00000463818 DNAI1Q9UI46 699 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 FCF1Q9Y324 198 aaKnown RBP19.24■□□□□ 0.67
SF3A1-205ENST00000463818 WASF2Q9Y6W5 498 aa19.24■□□□□ 0.67
SF3A1-205ENST00000463818 SIGLEC16A6NMB1 481 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 ENC1O14682 589 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 LRIG2O94898 1065 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 PCDH8O95206 1070 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 CD160O95971 181 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 PRLRP16471 622 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 GPD1P21695 349 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 GSCP56915 257 aaPredicted RBP19.23■□□□□ 0.67
SF3A1-205ENST00000463818 ZNF284Q2VY69 593 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 CCDC183Q5T5S1 534 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 HORMAD1Q86X24 394 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 GALNT15Q8N3T1 639 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 PCDH20Q8N6Y1 951 aaKnown RBP19.23■□□□□ 0.67
SF3A1-205ENST00000463818 ARHGEF2Q92974 986 aaKnown RBP19.23■□□□□ 0.67
SF3A1-205ENST00000463818 PPP1R16AQ96I34 528 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 CNDP2Q96KP4 475 aaKnown RBP19.23■□□□□ 0.67
SF3A1-205ENST00000463818 MYOCQ99972 504 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 TMEM248Q9NWD8 314 aa19.23■□□□□ 0.67
SF3A1-205ENST00000463818 RALYQ9UKM9 306 aaKnown RBP19.23■□□□□ 0.67
SF3A1-205ENST00000463818 ETFBP38117 255 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 MAPKAPK2P49137 400 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 DHRS13Q6UX07 377 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 PROSER1Q86XN7 944 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 TMEM145Q8NBT3 493 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 C3orf20Q8ND61 904 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 NTAN1Q96AB6 310 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 TBC1D31Q96DN5 1066 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 MAGEH1Q9H213 219 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 CCDC86Q9H6F5 360 aaKnown RBP19.22■□□□□ 0.67
SF3A1-205ENST00000463818 HECAQ9UBI9 543 aaPredicted RBP19.22■□□□□ 0.67
SF3A1-205ENST00000463818 ZFR2Q9UPR6 939 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms