RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MUC13Q9H3R2 512 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 PXMP2Q9NR77 195 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 POLIQ9UNA4 740 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 HOXB6P17509 224 aaKnown RBP16.02■□□□□ 0.15
SMC4-204ENST00000462787 NOMO1Q15155 1222 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 PCID2Q5JVF3 399 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 UBA2Q9UBT2 640 aaPredicted RBP16.02■□□□□ 0.15
SMC4-204ENST00000462787 LOC100506127A0A0U1RQW1 187 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 CCDC182A6NF36 153 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 MYL3P08590 195 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 MSX2P35548 267 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 CRADDP78560 199 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 MYDGFQ969H8 173 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 MFSD14AQ96MC6 490 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 DDX43Q9NXZ2 648 aaKnown RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 E5RJQ4 531 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 NOTUMQ6P988 496 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 MCFD2Q8NI22 146 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 SPATA17Q96L03 361 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 LENG8Q96PV6 779 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 RBM22Q9NW64 420 aaKnown RBP eCLIP16.01■□□□□ 0.155e-24■■■■■ 66.5
SMC4-204ENST00000462787 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 GMPPBQ9Y5P6 360 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 RNF19BQ6ZMZ0 732 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 ZNF540Q8NDQ6 660 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 FBXO30Q8TB52 745 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 GPR63Q9BZJ6 419 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 C1orf21Q9H246 121 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 SIX2Q9NPC8 291 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 SMPD3Q9NY59 655 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 SLC22A2O15244 555 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 CCNKO75909 580 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 DBTP11182 482 aaKnown RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 MLNP12872 115 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 TPSB2P20231 275 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 TPSAB1Q15661 275 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 TDRD10Q5VZ19 366 aaKnown RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 TMEM132CQ8N3T6 1108 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 LPGAT1Q92604 370 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 FOPNLQ96NB1 174 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 HDHD2Q9H0R4 259 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 UNC93B1Q9H1C4 597 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 WDR55Q9H6Y2 383 aaPredicted RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 INVSQ9Y283 1065 aa16.01■□□□□ 0.15
SMC4-204ENST00000462787 TDRKHQ9Y2W6 561 aaKnown RBP16.01■□□□□ 0.15
SMC4-204ENST00000462787 KCNH1O95259 989 aa16■□□□□ 0.15
SMC4-204ENST00000462787 CXCL8P10145 99 aa16■□□□□ 0.15
SMC4-204ENST00000462787 RAB10P61026 200 aa16■□□□□ 0.15
SMC4-204ENST00000462787 NPY5RQ15761 445 aa16■□□□□ 0.15
SMC4-204ENST00000462787 ATAD3BQ5T9A4 648 aa16■□□□□ 0.15
SMC4-204ENST00000462787 TLDC1Q6P9B6 456 aa16■□□□□ 0.15
SMC4-204ENST00000462787 SPESP1Q6UW49 350 aa16■□□□□ 0.15
SMC4-204ENST00000462787 UBR7Q8N806 425 aa16■□□□□ 0.15
SMC4-204ENST00000462787 ATG4CQ96DT6 458 aa16■□□□□ 0.15
SMC4-204ENST00000462787 SENP6Q9GZR1 1112 aaPredicted RBP16■□□□□ 0.15
SMC4-204ENST00000462787 ASB7Q9H672 318 aa16■□□□□ 0.15
SMC4-204ENST00000462787 REEP1Q9H902 201 aa16■□□□□ 0.15
SMC4-204ENST00000462787 ZNF221Q9UK13 617 aa16■□□□□ 0.15
SMC4-204ENST00000462787 MMP8P22894 467 aa16■□□□□ 0.15
SMC4-204ENST00000462787 SOAT1P35610 550 aa16■□□□□ 0.15
SMC4-204ENST00000462787 CCNG1P51959 295 aa16■□□□□ 0.15
SMC4-204ENST00000462787 YWHAZP63104 245 aaKnown RBP16■□□□□ 0.15
SMC4-204ENST00000462787 NEPROQ6NW34 567 aa16■□□□□ 0.15
SMC4-204ENST00000462787 CYP4Z1Q86W10 505 aa16■□□□□ 0.15
SMC4-204ENST00000462787 PDSS2Q86YH6 399 aa16■□□□□ 0.15
SMC4-204ENST00000462787 SLC41A1Q8IVJ1 513 aa16■□□□□ 0.15
SMC4-204ENST00000462787 TEKT5Q96M29 485 aa16■□□□□ 0.15
SMC4-204ENST00000462787 PRRG3Q9BZD7 231 aa16■□□□□ 0.15
SMC4-204ENST00000462787 SPRTNQ9H040 489 aaPredicted RBP16■□□□□ 0.15
SMC4-204ENST00000462787 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
SMC4-204ENST00000462787 ABCG1P45844 678 aa16■□□□□ 0.15
SMC4-204ENST00000462787 GSSP48637 474 aa16■□□□□ 0.15
SMC4-204ENST00000462787 PGM5Q15124 567 aa16■□□□□ 0.15
SMC4-204ENST00000462787 FAM182BQ5T319 152 aa16■□□□□ 0.15
SMC4-204ENST00000462787 DCAF12L1Q5VU92 463 aa16■□□□□ 0.15
SMC4-204ENST00000462787 THAP5Q7Z6K1 395 aa16■□□□□ 0.15
SMC4-204ENST00000462787 DNAJB14Q8TBM8 379 aa16■□□□□ 0.15
SMC4-204ENST00000462787 METTL6Q8TCB7 284 aa16■□□□□ 0.15
SMC4-204ENST00000462787 KCTD4Q8WVF5 259 aa16■□□□□ 0.15
SMC4-204ENST00000462787 TAMM41Q96BW9 452 aa16■□□□□ 0.15
SMC4-204ENST00000462787 SERAC1Q96JX3 654 aa16■□□□□ 0.15
SMC4-204ENST00000462787 GNPTGQ9UJJ9 305 aa16■□□□□ 0.15
SMC4-204ENST00000462787 PPM1HQ9ULR3 514 aa16■□□□□ 0.15
SMC4-204ENST00000462787 TELO2Q9Y4R8 837 aa16■□□□□ 0.15
SMC4-204ENST00000462787 USP12O75317 370 aa16■□□□□ 0.15
SMC4-204ENST00000462787 CCT3P49368 545 aaKnown RBP16■□□□□ 0.15
SMC4-204ENST00000462787 IDH3AP50213 366 aa16■□□□□ 0.15
SMC4-204ENST00000462787 C15orf59Q2T9L4 293 aaPredicted RBP16■□□□□ 0.15
SMC4-204ENST00000462787 PAGE2BQ5JRK9 111 aa16■□□□□ 0.15
SMC4-204ENST00000462787 RAB2BQ8WUD1 216 aa16■□□□□ 0.15
SMC4-204ENST00000462787 SNRNP25Q9BV90 132 aaKnown RBP16■□□□□ 0.15
SMC4-204ENST00000462787 SPATA2Q9UM82 520 aa16■□□□□ 0.15
SMC4-204ENST00000462787 FAM155BO75949 473 aa15.99■□□□□ 0.15
SMC4-204ENST00000462787 ACO1P21399 889 aaKnown RBP15.99■□□□□ 0.15
SMC4-204ENST00000462787 CDKN2BP42772 138 aa15.99■□□□□ 0.15
SMC4-204ENST00000462787 MAGEA8P43361 318 aa15.99■□□□□ 0.15
SMC4-204ENST00000462787 HARS2P49590 506 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms