RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 PCDH20Q8N6Y1 951 aaKnown RBP22.96■■□□□ 1.27
TRAF4-207ENST00000461195 OR14C36Q8NHC7 312 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 C1orf216Q8TAB5 229 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 PEBP4Q96S96 227 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 DNAJC7Q99615 494 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 SNRNP25Q9BV90 132 aaKnown RBP22.96■■□□□ 1.27
TRAF4-207ENST00000461195 GTPBP2Q9BX10 602 aaKnown RBP22.96■■□□□ 1.27
TRAF4-207ENST00000461195 TNKS2Q9H2K2 1166 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 DHX35Q9H5Z1 703 aaKnown RBP22.96■■□□□ 1.27
TRAF4-207ENST00000461195 SLC7A4O43246 635 aa22.95■■□□□ 1.26
TRAF4-207ENST00000461195 LRCH4O75427 683 aa22.95■■□□□ 1.26
TRAF4-207ENST00000461195 CD27P26842 260 aa22.95■■□□□ 1.26
TRAF4-207ENST00000461195 EIF4A3P38919 411 aaKnown RBP22.95■■□□□ 1.26
TRAF4-207ENST00000461195 MAP1BP46821 2468 aaKnown RBP22.95■■□□□ 1.26
TRAF4-207ENST00000461195 YBEYP58557 167 aaPredicted RBP22.95■■□□□ 1.26
TRAF4-207ENST00000461195 TSR1Q2NL82 804 aaKnown RBP22.95■■□□□ 1.26
TRAF4-207ENST00000461195 PSTKQ8IV42 348 aaKnown RBP22.95■■□□□ 1.26
TRAF4-207ENST00000461195 TMIEQ8NEW7 156 aa22.95■■□□□ 1.26
TRAF4-207ENST00000461195 FAM131CQ96AQ9 280 aa22.95■■□□□ 1.26
TRAF4-207ENST00000461195 NOL6Q9H6R4 1146 aaKnown RBP22.95■■□□□ 1.26
TRAF4-207ENST00000461195 ZNHIT6Q9NWK9 470 aaKnown RBP22.95■■□□□ 1.26
TRAF4-207ENST00000461195 DONSONQ9NYP3 566 aa22.95■■□□□ 1.26
TRAF4-207ENST00000461195 CACNA1EQ15878 2313 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 KDELR3O43731 214 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 ZNF821O75541 412 aaPredicted RBP22.94■■□□□ 1.26
TRAF4-207ENST00000461195 CD160O95971 181 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 PRNPP04156 253 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 CYP1A2P05177 515 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 IGHV4-34P06331 123 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 CTSLP07711 333 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 ADRB1P08588 477 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 PCK1P35558 622 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 PIGHQ14442 188 aaPredicted RBP22.94■■□□□ 1.26
TRAF4-207ENST00000461195 CA9Q16790 459 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 UAP1L1Q3KQV9 507 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 POM121L1PQ3SYA9 428 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 DPY19L3Q6ZPD9 716 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 CYP4V2Q6ZWL3 525 aaPredicted RBP22.94■■□□□ 1.26
TRAF4-207ENST00000461195 ZNF354CQ86Y25 554 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 CHST14Q8NCH0 376 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 NUP85Q9BW27 656 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 ZDHHC5Q9C0B5 715 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 OSGEPQ9NPF4 335 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 IL36AQ9UHA7 158 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 NENFQ9UMX5 172 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 FCF1Q9Y324 198 aaKnown RBP22.94■■□□□ 1.26
TRAF4-207ENST00000461195 ACTL7AQ9Y615 435 aa22.94■■□□□ 1.26
TRAF4-207ENST00000461195 ZSCAN5CA6NGD5 496 aaPredicted RBP22.93■■□□□ 1.26
TRAF4-207ENST00000461195 EEF2KO00418 725 aaKnown RBP22.93■■□□□ 1.26
TRAF4-207ENST00000461195 PLK4O00444 970 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 DNA2P51530 1060 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 CCR5P51681 352 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 AFF3P51826 1226 aaKnown RBP22.93■■□□□ 1.26
TRAF4-207ENST00000461195 CNTN1Q12860 1018 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 PARP15Q460N3 678 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 CARD16Q5EG05 197 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 PPM1JQ5JR12 505 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 UMODL1-AS1Q8N2C9 162 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 MINDY1Q8N5J2 469 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 ISG20Q96AZ6 181 aaKnown RBP22.93■■□□□ 1.26
TRAF4-207ENST00000461195 KCTD15Q96SI1 283 aaPredicted RBP22.93■■□□□ 1.26
TRAF4-207ENST00000461195 KDM4CQ9H3R0 1056 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 DEF6Q9H4E7 631 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 IP6K2Q9UHH9 426 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 ANAPC7Q9UJX3 599 aa22.93■■□□□ 1.26
TRAF4-207ENST00000461195 TPX2Q9ULW0 747 aaKnown RBP22.93■■□□□ 1.26
TRAF4-207ENST00000461195 CNOT1A5YKK6 2376 aaKnown RBP22.93■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3DA0A087WVF3 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3IA0A087WXS9 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3EA0A087X179 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3KA0A087X1G2 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 SSU72P8A0A1W2PR75 194 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3FA6NER0 549 aaPredicted RBP22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3LB9A6J9 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 RASA4BC9J798 803 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 KPNA3O00505 521 aaPredicted RBP22.92■■□□□ 1.26
TRAF4-207ENST00000461195 RASA4O43374 803 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3HP0C7X1 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 ZNF135P52742 658 aaPredicted RBP22.92■■□□□ 1.26
TRAF4-207ENST00000461195 CCDC15Q0P6D6 951 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 GRIK2Q13002 908 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 MAPK8IP2Q13387 824 aaPredicted RBP22.92■■□□□ 1.26
TRAF4-207ENST00000461195 SLC18A3Q16572 532 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 ARSIQ5FYB1 569 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 AGBL4Q5VU57 503 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3GQ6DHY5 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3CQ6IPX1 549 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 SARM1Q6SZW1 724 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 PLPP6Q8IY26 295 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TBC1D3Q8IZP1 549 aaPredicted RBP22.92■■□□□ 1.26
TRAF4-207ENST00000461195 GRIN3AQ8TCU5 1115 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 ARHGEF26Q96DR7 871 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 HMCESQ96FZ2 354 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 TM9SF3Q9HD45 589 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 DYRK4Q9NR20 520 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 ABHD10Q9NUJ1 306 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 SLCO1B1Q9Y6L6 691 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 PLXNA2O75051 1894 aa22.92■■□□□ 1.26
TRAF4-207ENST00000461195 A0A1W2PPC4 97 aa22.91■■□□□ 1.26
TRAF4-207ENST00000461195 C10orf142B7Z368 130 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms