RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MUSKO15146 869 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 PPFIA2O75334 1257 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 GABBR2O75899 941 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 PAEPP09466 180 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 FAM87AP0C7U9 286 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 EPB41P11171 864 aaKnown RBP17.64■□□□□ 0.41
TOP3A-202ENST00000461127 GP1BBP13224 206 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 ITGB6P18564 788 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 TBXAS1P24557 533 aaPredicted RBP17.64■□□□□ 0.41
TOP3A-202ENST00000461127 EIF3IQ13347 325 aaKnown RBP17.64■□□□□ 0.41
TOP3A-202ENST00000461127 FZD2Q14332 565 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 DEFB133Q30KQ1 61 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 ZC3H12AQ5D1E8 599 aaKnown RBP17.64■□□□□ 0.41
TOP3A-202ENST00000461127 TAC4Q86UU9 113 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 CIR1Q86X95 450 aaPredicted RBP17.64■□□□□ 0.41
TOP3A-202ENST00000461127 JAMLQ86YT9 394 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 ZSCAN1Q8NBB4 408 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 LMX1AQ8TE12 382 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 SYNDIG1Q9H7V2 258 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 VPS28Q9UK41 221 aa17.64■□□□□ 0.41
TOP3A-202ENST00000461127 SMC2O95347 1197 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 PRNPP04156 253 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 FYNP06241 537 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 JUNDP17535 347 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 SLC5A2P31639 672 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 CHRNA3P32297 505 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 RABIFP47224 123 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 MCCD1P59942 119 aaPredicted RBP17.63■□□□□ 0.41
TOP3A-202ENST00000461127 UBAP2LQ14157 1087 aaKnown RBP17.63■□□□□ 0.41
TOP3A-202ENST00000461127 CNGA2Q16280 664 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 KYAT3Q6YP21 454 aaKnown RBP17.63■□□□□ 0.41
TOP3A-202ENST00000461127 FBXO39Q8N4B4 442 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 SH2D3CQ8N5H7 860 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 LIN37Q96GY3 246 aaPredicted RBP17.63■□□□□ 0.41
TOP3A-202ENST00000461127 FEM1AQ9BSK4 669 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 STRADBQ9C0K7 418 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 GPR27Q9NS67 375 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 SEPT10Q9P0V9 454 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 MAPK8IP1Q9UQF2 711 aa17.63■□□□□ 0.41
TOP3A-202ENST00000461127 KCNU1A8MYU2 1149 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 TMX2-CTNND1H3BSU7 103 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 TLE1Q04724 770 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
TOP3A-202ENST00000461127 PNOCQ13519 176 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 PERM1Q5SV97 790 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 SEL1L3Q68CR1 1132 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 CXorf57Q6NSI4 855 aaKnown RBP17.62■□□□□ 0.41
TOP3A-202ENST00000461127 TMEM270Q6UE05 265 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 ERN2Q76MJ5 926 aaKnown RBP17.62■□□□□ 0.41
TOP3A-202ENST00000461127 GUF1Q8N442 669 aaKnown RBP17.62■□□□□ 0.41
TOP3A-202ENST00000461127 TMIEQ8NEW7 156 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 BTN2A2Q8WVV5 523 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 TFAP2BQ92481 460 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 PPP1R16AQ96I34 528 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 BMFQ96LC9 184 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 SLC17A9Q9BYT1 436 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 ST7Q9NRC1 585 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.62■□□□□ 0.41
TOP3A-202ENST00000461127 SPASTQ9UBP0 616 aa17.62■□□□□ 0.41
TOP3A-202ENST00000461127 ZFR2Q9UPR6 939 aaKnown RBP17.62■□□□□ 0.41
TOP3A-202ENST00000461127 POM121BA6NF01 834 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 CTSLP07711 333 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 SLC2A3P11169 496 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 RPS21P63220 83 aaKnown RBP17.61■□□□□ 0.41
TOP3A-202ENST00000461127 TMEM259Q4ZIN3 620 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 KIAA1161Q6NSJ0 714 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 BEND5Q7L4P6 421 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 RAB11FIP2Q7L804 512 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 ATP11CQ8NB49 1132 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 SMARCE1Q969G3 411 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 ALG14Q96F25 216 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 FEM1CQ96JP0 617 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 RPRD1AQ96P16 312 aaPredicted RBP17.61■□□□□ 0.41
TOP3A-202ENST00000461127 CCDC3Q9BQI4 270 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 BOCQ9BWV1 1114 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 HDAC8Q9BY41 377 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 EPB41L5Q9HCM4 733 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 ACSL6Q9UKU0 697 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 COQ4Q9Y3A0 265 aa17.61■□□□□ 0.41
TOP3A-202ENST00000461127 SPTAN1Q13813 2472 aaKnown RBP17.61■□□□□ 0.41
TOP3A-202ENST00000461127 USP9XQ93008 2570 aaPredicted RBP17.61■□□□□ 0.41
TOP3A-202ENST00000461127 SYCE3A1L190 88 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 FPGTO14772 594 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 CETN3O15182 167 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 RHOBTB3O94955 611 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 TRUB2O95900 331 aaKnown RBP17.6■□□□□ 0.41
TOP3A-202ENST00000461127 LIPCP11150 499 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 UGT1A5P35504 534 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 ACADSBP45954 432 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 PDX1P52945 283 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 KRT83P78385 493 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 PDE1CQ14123 709 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-202ENST00000461127 DRAP1Q14919 205 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-202ENST00000461127 TGIF1Q15583 401 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 CBWD6Q4V339 395 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 DCAF17Q5H9S7 520 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-202ENST00000461127 CBWD3Q5JTY5 395 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms