RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 ZNF354CQ86Y25 554 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 CCDC50Q8IVM0 306 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 SLC35F6Q8N357 371 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 OR2A12Q8NGT7 310 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 OR2T3Q8NH03 318 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 NELL1Q92832 810 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 FATE1Q969F0 183 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 OLFM3Q96PB7 478 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 CARD9Q9H257 536 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 SAE1Q9UBE0 346 aaPredicted RBP13.08□□□□□ -0.32
MECP2-206ENST00000460227 UBA2Q9UBT2 640 aaPredicted RBP13.08□□□□□ -0.32
MECP2-206ENST00000460227 HEY1Q9Y5J3 304 aa13.08□□□□□ -0.32
MECP2-206ENST00000460227 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 MCF2LO15068 1137 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 MATN3O15232 486 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 ALDH1A2O94788 518 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 TJP3O95049 919 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 APBB3O95704 486 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 ZNF33AQ06730 810 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 NSUN2Q08J23 767 aaKnown RBP eCLIP13.07□□□□□ -0.32
MECP2-206ENST00000460227 PDK1Q15118 436 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 ANGPT1Q15389 498 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 ZNF528Q3MIS6 628 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 CARD16Q5EG05 197 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 TSSK4Q6SA08 328 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 TMPRSS6Q8IU80 811 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 PCDH20Q8N6Y1 951 aaKnown RBP13.07□□□□□ -0.32
MECP2-206ENST00000460227 TSTD1Q8NFU3 115 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 MAML1Q92585 1016 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 VOPP1Q96AW1 172 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 HDAC11Q96DB2 347 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 HHIPQ96QV1 700 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 MKRN2Q9H000 416 aaKnown RBP13.07□□□□□ -0.32
MECP2-206ENST00000460227 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 FBRSQ9HAH7 460 aa13.07□□□□□ -0.32
MECP2-206ENST00000460227 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
MECP2-206ENST00000460227 FCF1Q9Y324 198 aaKnown RBP13.07□□□□□ -0.32
MECP2-206ENST00000460227 TCRBV21S2A2A0A5A6 115 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 KCNK3O14649 394 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 ENC1O14682 589 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 TMCC1O94876 653 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 APOC2P02655 101 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 SP9P0CG40 484 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 GABRG2P18507 467 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 DNA2P51530 1060 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 PPIDQ08752 370 aaKnown RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 DMWDQ09019 674 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 SLC10A7Q0GE19 358 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 KLF1Q13351 362 aaPredicted RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 HNRNPDQ14103 355 aaKnown RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 TMCO4Q5TGY1 634 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 C22orf39Q6P5X5 142 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 Q6ZVU0 165 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 STK40Q8N2I9 435 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 ATPAF2Q8N5M1 289 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 LRRN4Q8WUT4 740 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 P3H4Q92791 437 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 ERLEC1Q96DZ1 483 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 MRGPRX1Q96LB2 322 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 LGMNQ99538 433 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 PRRX2Q99811 253 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 FAM126AQ9BYI3 521 aaPredicted RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 RSPH9Q9H1X1 276 aaPredicted RBP13.06□□□□□ -0.32
MECP2-206ENST00000460227 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 SP110Q9HB58 689 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 PPM1HQ9ULR3 514 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 WDFY4Q6ZS81 3184 aa13.06□□□□□ -0.32
MECP2-206ENST00000460227 ALOX15BO15296 676 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 ZBTB24O43167 697 aaPredicted RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 POP4O95707 220 aaKnown RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 GSRP00390 522 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 NDUFV2P19404 249 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 CSNK1DP48730 415 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 RENBPP51606 427 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 NRLP54845 237 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 GNG11P61952 73 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 RPS14P62263 151 aaKnown RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 XRCC4Q13426 336 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 ELAVL3Q14576 367 aaKnown RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 LBRQ14739 615 aaKnown RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 MYLK3Q32MK0 819 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 MARC1Q5VT66 337 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 TIGD7Q6NT04 549 aaPredicted RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 SLC13A5Q86YT5 568 aaPredicted RBP13.05□□□□□ -0.32
MECP2-206ENST00000460227 CCDC13Q8IYE1 715 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 CHST14Q8NCH0 376 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 CCNYQ8ND76 341 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 TMIEQ8NEW7 156 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 MDGA1Q8NFP4 955 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 PSKH2Q96QS6 385 aa13.05□□□□□ -0.32
MECP2-206ENST00000460227 KCNH6Q9H252 994 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms