RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 KPNA3O00505 521 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 PLRG1O43660 514 aaKnown RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TPM3P06753 285 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 CTSLP07711 333 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3HP0C7X1 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 HTR7P34969 479 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ACVRL1P37023 503 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ZBED6P86452 979 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 HNRNPDQ14103 355 aaKnown RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 POLD3Q15054 466 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 HLA-BQ31612 363 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 POM121L1PQ3SYA9 428 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TDRD12Q587J7 1177 aaKnown RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 AGBL4Q5VU57 503 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3GQ6DHY5 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3CQ6IPX1 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ADAT2Q7Z6V5 191 aaKnown RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 VPS36Q86VN1 386 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3Q8IZP1 549 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 RTL3Q8N8U3 475 aaKnown RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 FNIP1Q8TF40 1166 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ISG20Q96AZ6 181 aaKnown RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ZNF653Q96CK0 615 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ISCUQ9H1K1 167 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TNKS2Q9H2K2 1166 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 CATSPERBQ9H7T0 1116 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 MRPL47Q9HD33 250 aaKnown RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 IL36AQ9UHA7 158 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 ANKRD6Q9Y2G4 727 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 SCINQ9Y6U3 715 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 EIF3CLB5ME19 914 aaKnown RBP16.44■□□□□ 0.22
COL7A1-203ENST00000459756 FGF10O15520 208 aaPredicted RBP16.44■□□□□ 0.22
COL7A1-203ENST00000459756 LATO43561 262 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 CREB3O43889 395 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 SERPING1P05155 500 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 PMLP29590 882 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 NUDT1P36639 197 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 KIF19Q2TAC6 998 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 HGSNATQ68CP4 663 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 DPY19L3Q6ZPD9 716 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 DNAAF5Q86Y56 855 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 PLPP6Q8IY26 295 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 CHST14Q8NCH0 376 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 CPLX3Q8WVH0 158 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 SKA1Q96BD8 255 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 SLC6A18Q96N87 628 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 EIF3CQ99613 913 aaKnown RBP16.44■□□□□ 0.22
COL7A1-203ENST00000459756 TSPY26PQ9H489 355 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 PREBQ9HCU5 417 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 DYRK4Q9NR20 520 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 DONSONQ9NYP3 566 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 LUC7L2Q9Y383 392 aaKnown RBP16.44■□□□□ 0.22
COL7A1-203ENST00000459756 PLXNA2O75051 1894 aa16.44■□□□□ 0.22
COL7A1-203ENST00000459756 PCNX2A6NKB5 2137 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 ZSCAN5CA6NGD5 496 aaPredicted RBP16.43■□□□□ 0.22
COL7A1-203ENST00000459756 WASH4PA8MWX3 477 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 VILLO15195 856 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 KDELR3O43731 214 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 RNF8O76064 485 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 CD160O95971 181 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 DNA2P51530 1060 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 C21orf59P57076 290 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 YBEYP58557 167 aaPredicted RBP16.43■□□□□ 0.22
COL7A1-203ENST00000459756 PPP2CBP62714 309 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 PPP2CAP67775 309 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 CARD16Q5EG05 197 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 ARSIQ5FYB1 569 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 PIP5KL1Q5T9C9 394 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 PRPF39Q86UA1 669 aaKnown RBP16.43■□□□□ 0.22
COL7A1-203ENST00000459756 TRIM69Q86WT6 500 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 GRIN3AQ8TCU5 1115 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 PPP1R16AQ96I34 528 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 SERAC1Q96JX3 654 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 NCAPGQ9BPX3 1015 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 HEPHQ9BQS7 1158 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 HDAC8Q9BY41 377 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 NOL6Q9H6R4 1146 aaKnown RBP16.43■□□□□ 0.22
COL7A1-203ENST00000459756 EBF2Q9HAK2 575 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 IL21RQ9HBE5 538 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 TM7SF3Q9NS93 570 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 AP4E1Q9UPM8 1137 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 FNDC3AQ9Y2H6 1198 aaKnown RBP16.43■□□□□ 0.22
COL7A1-203ENST00000459756 FCF1Q9Y324 198 aaKnown RBP16.43■□□□□ 0.22
COL7A1-203ENST00000459756 PCDHGB2Q9Y5G2 931 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 SNX11Q9Y5W9 270 aa16.43■□□□□ 0.22
COL7A1-203ENST00000459756 KNL1Q8NG31 2342 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 PRPSAP2O60256 369 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 DFNA5O60443 496 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 LEFTY1O75610 366 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 GYPCP04921 128 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 CD38P28907 300 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 CTSKP43235 329 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-203ENST00000459756 TAS2R38P59533 333 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 TPI1P60174 286 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 SHC2P98077 582 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 PARP15Q460N3 678 aa16.42■□□□□ 0.22
COL7A1-203ENST00000459756 SLC45A4Q5BKX6 768 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms