RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TTC13Q8NBP0 860 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 NAPGQ99747 312 aaPredicted RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 POLR3BQ9NW08 1133 aaPredicted RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 SPATA6Q9NWH7 488 aaPredicted RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 MYO18AQ92614 2054 aaKnown RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 CES2O00748 559 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 MATN3O15232 486 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 CEP104O60308 925 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 SYNCRIPO60506 623 aaKnown RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 ZNF821O75541 412 aaPredicted RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 TMCC1O94876 653 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 PRLRP16471 622 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 COL9A1P20849 921 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 OTUD4Q01804 1114 aaKnown RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 SATB1Q01826 763 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 XRCC4Q13426 336 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 HNRNPDQ14103 355 aaKnown RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 CYTH1Q15438 398 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 C9orf64Q5T6V5 341 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 TMCO4Q5TGY1 634 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 PAPD7Q5XG87 772 aaKnown RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 KIAA1211LQ6NV74 962 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 NYAP1Q6ZVC0 841 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 PLPP6Q8IY26 295 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 CCDC13Q8IYE1 715 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 RASGEF1CQ8N431 466 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 CCNYQ8ND76 341 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 ACTL9Q8TC94 416 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 NSMCE1Q8WV22 266 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 MAML1Q92585 1016 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 HAUS1Q96CS2 278 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 OSBPL9Q96SU4 736 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 LGMNQ99538 433 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 MTG2Q9H4K7 406 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 FBRSQ9HAH7 460 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 POLMQ9NP87 494 aaPredicted RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 PRSS16Q9NQE7 514 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 NYNRINQ9P2P1 1898 aaKnown RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 FCF1Q9Y324 198 aaKnown RBP18.19■□□□□ 0.5
FAM239A-203ENST00000456563 ATG2BQ96BY7 2078 aa18.19■□□□□ 0.5
FAM239A-203ENST00000456563 TCRBV7S2A1N4TA0A589 114 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 CTAGE9A4FU28 777 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 HACD1B0YJ81 288 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 SIN3BO75182 1162 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 C7P10643 843 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 VAV1P15498 845 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 TCP1P17987 556 aaKnown RBP18.18■□□□□ 0.5
FAM239A-203ENST00000456563 NUBP1P53384 320 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 LBRQ14739 615 aaKnown RBP18.18■□□□□ 0.5
FAM239A-203ENST00000456563 PRKD1Q15139 912 aaPredicted RBP18.18■□□□□ 0.5
FAM239A-203ENST00000456563 Q6ZVU0 165 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 C1orf210Q8IVY1 113 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 TEX26Q8N6G2 289 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 MAIP1Q8WWC4 291 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 LRFN3Q9BTN0 628 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 PRMT8Q9NR22 394 aaPredicted RBP18.18■□□□□ 0.5
FAM239A-203ENST00000456563 SEPT3Q9UH03 358 aa18.18■□□□□ 0.5
FAM239A-203ENST00000456563 TTC7AQ9ULT0 858 aaPredicted RBP18.18■□□□□ 0.5
FAM239A-203ENST00000456563 FANCGO15287 622 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 LAMTOR5O43504 91 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 FGGP02679 453 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 RENBPP51606 427 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 SLC10A7Q0GE19 358 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 MARC1Q5VT66 337 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 ZC3H18Q86VM9 953 aaKnown RBP18.17■□□□□ 0.5
FAM239A-203ENST00000456563 CAMKK1Q8N5S9 505 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 OR2A12Q8NGT7 310 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 LRRN4Q8WUT4 740 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 TFB1MQ8WVM0 346 aaKnown RBP18.17■□□□□ 0.5
FAM239A-203ENST00000456563 CCDC114Q96M63 670 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 PSKH2Q96QS6 385 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 FRMD8P1Q9BZ68 369 aaPredicted RBP18.17■□□□□ 0.5
FAM239A-203ENST00000456563 LHX3Q9UBR4 397 aa18.17■□□□□ 0.5
FAM239A-203ENST00000456563 K7ESF4 209 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 GSRP00390 522 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 CCNB1P14635 433 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 HOXA6P31267 233 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 COPAP53621 1224 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 EIF3EP60228 445 aaKnown RBP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 RHOAP61586 193 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 SNRPD1P62314 119 aaKnown RBP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 IFI35P80217 286 aaPredicted RBP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 AP1B1Q10567 949 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 ELAVL3Q14576 367 aaKnown RBP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 SLC45A4Q5BKX6 768 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 CARD16Q5EG05 197 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 SYT10Q6XYQ8 523 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 ZSCAN30Q86W11 494 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 BBS5Q8N3I7 341 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 TSTD1Q8NFU3 115 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 OR2AP1Q8NGE2 309 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 OR2T3Q8NH03 318 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 ACTRT1Q8TDG2 376 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 QKIQ96PU8 341 aaKnown RBP eCLIP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 FAM129BQ96TA1 746 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 CINPQ9BW66 212 aaPredicted RBP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 TM6SF2Q9BZW4 377 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 TNKS2Q9H2K2 1166 aa18.16■□□□□ 0.5
FAM239A-203ENST00000456563 AMACRQ9UHK6 382 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms